Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_C24
         (491 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052298-1|AAH52298.1|  237|Homo sapiens N-acetyltransferase 11 ...    82   9e-16
BC041617-1|AAH41617.1|  237|Homo sapiens N-acetyltransferase 11 ...    82   9e-16
AK023910-1|BAB14720.1|  237|Homo sapiens protein ( Homo sapiens ...    82   9e-16
AJ252060-1|CAB64449.1|  708|Homo sapiens TRABID protein protein.       29   6.6  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    24   9.6  

>BC052298-1|AAH52298.1|  237|Homo sapiens N-acetyltransferase 11
           protein.
          Length = 237

 Score = 82.2 bits (194), Expect = 9e-16
 Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = +1

Query: 151 EKRQARKLEQRRIADGM-SLVTSAKNLKDLPSLCKELMVYNNLDIEVEMYIQKVTELDKN 327
           EK+Q R LE+R   D + + V +A  L D          Y+   + V +  ++V+ L+  
Sbjct: 10  EKKQKR-LEERAAMDAVCAKVDAANRLGDPLEAFPVFKKYDRNGLNVSIECKRVSGLEPA 68

Query: 328 VLQWAIDLTERNMRSLYETCAWGWNSERKMAEMTDESAWYLIAKEKTGTNLAFS 489
            + WA DLT+ NM+++YE   WGW    K  EMTD+ AWYLIA E +   +AFS
Sbjct: 69  TVDWAFDLTKTNMQTMYEQSEWGWKDREKREEMTDDRAWYLIAWENSSVPVAFS 122


>BC041617-1|AAH41617.1|  237|Homo sapiens N-acetyltransferase 11
           protein.
          Length = 237

 Score = 82.2 bits (194), Expect = 9e-16
 Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = +1

Query: 151 EKRQARKLEQRRIADGM-SLVTSAKNLKDLPSLCKELMVYNNLDIEVEMYIQKVTELDKN 327
           EK+Q R LE+R   D + + V +A  L D          Y+   + V +  ++V+ L+  
Sbjct: 10  EKKQKR-LEERAAMDAVCAKVDAANRLGDPLEAFPVFKKYDRNGLNVSIECKRVSGLEPA 68

Query: 328 VLQWAIDLTERNMRSLYETCAWGWNSERKMAEMTDESAWYLIAKEKTGTNLAFS 489
            + WA DLT+ NM+++YE   WGW    K  EMTD+ AWYLIA E +   +AFS
Sbjct: 69  TVDWAFDLTKTNMQTMYEQSEWGWKDREKREEMTDDRAWYLIAWENSSVPVAFS 122


>AK023910-1|BAB14720.1|  237|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13848 fis, clone THYRO1000855. ).
          Length = 237

 Score = 82.2 bits (194), Expect = 9e-16
 Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = +1

Query: 151 EKRQARKLEQRRIADGM-SLVTSAKNLKDLPSLCKELMVYNNLDIEVEMYIQKVTELDKN 327
           EK+Q R LE+R   D + + V +A  L D          Y+   + V +  ++V+ L+  
Sbjct: 10  EKKQKR-LEERAAMDAVCAKVDAANRLGDPLEAFPVFKKYDRNGLNVSIECKRVSGLEPA 68

Query: 328 VLQWAIDLTERNMRSLYETCAWGWNSERKMAEMTDESAWYLIAKEKTGTNLAFS 489
            + WA DLT+ NM+++YE   WGW    K  EMTD+ AWYLIA E +   +AFS
Sbjct: 69  TVDWAFDLTKTNMQTMYEQSEWGWKDREKREEMTDDRAWYLIAWENSSVPVAFS 122


>AJ252060-1|CAB64449.1|  708|Homo sapiens TRABID protein protein.
          Length = 708

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 20/84 (23%), Positives = 39/84 (46%)
 Frame = +1

Query: 211 TSAKNLKDLPSLCKELMVYNNLDIEVEMYIQKVTELDKNVLQWAIDLTERNMRSLYETCA 390
           T A +++DLP   +E +    LD +V    QK  E +  ++ W+++L  R    LY    
Sbjct: 382 TLAADIEDLPPTVQEKLFDEVLDRDV----QKELEEESPIINWSLELATRLDSRLY--AL 435

Query: 391 WGWNSERKMAEMTDESAWYLIAKE 462
           W   +   + +   ++ W +  K+
Sbjct: 436 WNRTAGDCLLDSVLQATWGIYDKD 459


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 24.2 bits (50), Expect(2) = 9.6
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 327 IFVKFSDLLYVHFYLYVEIIIHHQFFT 247
           IF+     +Y++ Y+Y+ + I+   FT
Sbjct: 17  IFIYIFIYIYIYVYVYIYLYIYFYIFT 43



 Score = 23.4 bits (48), Expect(2) = 9.6
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -3

Query: 189 YTTLFKFSSLPLFFVFVYVGNCFFAHVYTNKVIFKFKICTFH 64
           Y   + F+ + L+ +F+Y+  C + ++Y    IF +     H
Sbjct: 36  YIYFYIFTYIYLY-IFIYIYICLYIYLYIYLYIFTYIYIYLH 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,957,802
Number of Sequences: 237096
Number of extensions: 1319834
Number of successful extensions: 6014
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6010
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)