Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C24
(491 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 31 0.005
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 24 0.76
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 22 3.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 4.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 5.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 5.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 5.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 7.1
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.4
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 31.5 bits (68), Expect = 0.005
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 265 YNNLDIEVEMYIQK-VTELDKNVLQWAIDLTERNMRSLYETCAWGWNSERKMAEM 426
Y L++E E + + +T + + A+ LTER ++ ++ W E KMA M
Sbjct: 18 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASM 72
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 24.2 bits (50), Expect = 0.76
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 361 NMRSLYETCAWGWNSERK 414
N S++ AW WN ERK
Sbjct: 163 NWLSVFWGSAWQWNEERK 180
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 311 VTFCMYISTSMSRLLYTISSLHSEGKSFKFLAD 213
VT C+++++ LYT + + E FLA+
Sbjct: 67 VTDCIFVTSEPGYFLYTSKNDNEEVCGIYFLAE 99
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 476 FVPVFSLAMRYHADSSVI 423
F PV+ + ++H DS VI
Sbjct: 155 FPPVYEILPQHHLDSRVI 172
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 235 FFNLIVPCVLIASMAVLGFTLPPDS 259
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 198 FFNLIVPCVLISSMALLGFTLPPDS 222
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 198 FFNLIVPCVLISSMALLGFTLPPDS 222
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 198 FFNLIVPCVLISSMALLGFTLPPDS 222
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 198 FFNLIVPCVLISSMALLGFTLPPDS 222
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 198 FFNLIVPCVLISSMALLGFTLPPDS 222
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 198 FFNLIVPCVLISSMALLGFTLPPDS 222
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.4 bits (43), Expect = 5.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 274 DYYTPSVLYIV 242
DYY PS+L +V
Sbjct: 237 DYYIPSILIVV 247
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 266 FFNLIVPCVLISSMALLGFTLPPDS 290
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 462 FFGYEVPC*FICHFRHFSFTVPSPS 388
FF VPC I FT+P S
Sbjct: 266 FFNLIVPCVLISSMALLGFTLPPDS 290
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 7.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 444 VPHSQRKDWHKP 479
+PH + DW KP
Sbjct: 279 LPHLEEFDWQKP 290
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 458 LAMRYHADSSVISAIFRSLFHPQAHVS 378
L ++ H+DSSV+ + S P+ +S
Sbjct: 277 LHIKTHSDSSVVGSPRDSPIEPEIEIS 303
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 296 YISTSMSRLLYTISS 252
Y+ST+++ LLY I S
Sbjct: 338 YLSTTVNPLLYNIMS 352
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,159
Number of Sequences: 438
Number of extensions: 2541
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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