Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C23
(293 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 30 0.062
SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces... 27 0.76
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 1.8
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 25 2.3
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 25 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 3.1
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 25 3.1
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 3.1
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 24 4.0
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 24 5.3
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 24 5.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 24 5.3
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 24 5.3
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 23 7.1
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 23 7.1
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 23 9.3
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 23 9.3
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 245 PTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTTRHF 99
PT+ + + TT+ +T LT P++GT + T +PTT ++
Sbjct: 191 PTTILIVTVPTTTTTTTVGYPGSVTTTLTGTPSNGTVIDTVEVPTTTNY 239
Score = 29.1 bits (62), Expect = 0.14
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -1
Query: 272 IPIRASHILPTSEIFLGAEATTSISTTPTALHCPNL---LTLQPNSGTAVSTAIIPTTRH 102
+P + PT+ +++ T+++TT T + ++ LT P++GT + T IPTT +
Sbjct: 414 VPHSGNETGPTT-VYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEIPTTTN 472
Query: 101 F 99
+
Sbjct: 473 Y 473
Score = 28.7 bits (61), Expect = 0.19
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -1
Query: 272 IPIRASHILPTSEIFLGAEATTSISTTPTALHCPNL---LTLQPNSGTAVSTAIIPTTRH 102
+P + PT+ +++ T+++TT T + ++ LT P++GT + T +PTT +
Sbjct: 258 VPHSGNETGPTT-VYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVPTTTN 316
Query: 101 F 99
+
Sbjct: 317 Y 317
Score = 28.7 bits (61), Expect = 0.19
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -1
Query: 272 IPIRASHILPTSEIFLGAEATTSISTTPTALHCPNL---LTLQPNSGTAVSTAIIPTTRH 102
+P + PT+ +++ T+++TT T + ++ LT P++GT + T +PTT +
Sbjct: 336 VPHSGNETGPTT-VYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVPTTTN 394
Query: 101 F 99
+
Sbjct: 395 Y 395
Score = 28.7 bits (61), Expect = 0.19
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -1
Query: 272 IPIRASHILPTSEIFLGAEATTSISTTPTALHCPNL---LTLQPNSGTAVSTAIIPTTRH 102
+P + PT+ +++ T+++TT T + ++ LT P++GT + T +PTT +
Sbjct: 492 VPHSGNETGPTT-VYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVPTTTN 550
Query: 101 F 99
+
Sbjct: 551 Y 551
Score = 28.7 bits (61), Expect = 0.19
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -1
Query: 272 IPIRASHILPTSEIFLGAEATTSISTTPTALHCPNL---LTLQPNSGTAVSTAIIPTTRH 102
+P + PT+ +++ T+++TT T + ++ LT P++GT + T +PTT +
Sbjct: 570 VPHSGNETGPTT-VYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVPTTTN 628
Query: 101 F 99
+
Sbjct: 629 Y 629
>SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 497
Score = 26.6 bits (56), Expect = 0.76
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 240 QRNLSWSRSHHLHIYHPHCTPLPKFVN 160
+R ++W +H+H+Y +PL K ++
Sbjct: 390 ERMVAWRDEYHVHLYSASRSPLTKVID 416
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 209 TSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTTRH 102
T+ +T P H + T+ P + +T ++P T H
Sbjct: 104 TTTTTAPPTTHVNSTTTVVPPTTHVNTTTVVPPTTH 139
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 209 TSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
TSI P+ H T+ P + +T + PTT
Sbjct: 67 TSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTT 100
Score = 23.4 bits (48), Expect = 7.1
Identities = 13/56 (23%), Positives = 21/56 (37%)
Frame = -1
Query: 269 PIRASHILPTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTTRH 102
P SH T+ + T+ + PT T P + +T ++P T H
Sbjct: 72 PPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTH 127
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 25.0 bits (52), Expect = 2.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 213 HHLHIYHPHCTPLPKFVNTPAKFWNRRFHGYYSNHQTFSIL 91
H +HI H P +NTP N G+ +N+ S++
Sbjct: 399 HPMHIRHSQSDFYPSGINTPVSGINYPNLGFSANNSVQSLV 439
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 25.0 bits (52), Expect = 2.3
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 230 FLGAEATTSI--STTPTALHCPNLLTLQPNSGTAVSTAIIPTTRHFL 96
+ GA+A ++ S+ T L PN+ T+Q + A +P T +L
Sbjct: 107 YSGAQAIKALRESSVHTILINPNIATIQSSHSLADEIYFLPVTAEYL 153
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 209 TSISTTPTALHCPNLLTLQPNSGTAVSTAIIP 114
T I T PT LH +QP +T I+P
Sbjct: 1159 TGIMTQPTGLHTQATGMMQPTGMQPQATGIMP 1190
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 24.6 bits (51), Expect = 3.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 269 PIRASHILPTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
PI AS +PTS L + S PT P ++ NS S++I +T
Sbjct: 98 PITAS--VPTSSSILSNSTIPTTSPVPTTSSTPTSSSILSNSTIPSSSSISAST 149
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -1
Query: 245 PTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPT 111
P+S + TT++ P A+H + P S + + +PT
Sbjct: 705 PSSALVSATSPTTNVPIVPEAVHLSTAFSTAPVSTIVSNISPLPT 749
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 221 AEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
++ T S+ ++ CP T+ N T +T I PT+
Sbjct: 42 SQDTNSVGGEASSTACPLFTTIYTNGITPGTTTIYPTS 79
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 23.8 bits (49), Expect = 5.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 279 TANPN*GVAYFAHQRNLSWSRSH 211
+ANP+ YFA RN W H
Sbjct: 495 SANPSESDTYFAMFRNFDWFVGH 517
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 121 IAVETAVPEFGWSVNKFGQWSAVGVVDMEVVASAPRK 231
+A+ETA F ++KFG +S D ++ RK
Sbjct: 86 VALETATKSFSLDLDKFGGYSFDYTRDGRMILLGGRK 122
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 23.8 bits (49), Expect = 5.3
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 92 KIENVWWLE**PWKRRFQNLAGVLTNLGN 178
+I+ +WW++ + ++L L NLG+
Sbjct: 178 RIQPIWWMDEFAERNGIESLLSALRNLGH 206
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 180 PLPK-FVNTPAKFWNRRFHGYYSNHQTFSILG*N 82
P+P F+++ + F+N+RF Y +++ N
Sbjct: 30 PIPSNFIHSTSGFFNKRFQNYTKRQICYNVASPN 63
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 222 SRSHHLHIYHPHCTPLPKFVNTP 154
SRS L + HP+ P PK + P
Sbjct: 342 SRSESLPLTHPNSEPNPKLDSQP 364
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -1
Query: 203 ISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
++ +PT H P + SG + ST + P+T
Sbjct: 374 LANSPTPRHLPYTWSRHSTSGPSRSTVLNPST 405
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 23.0 bits (47), Expect = 9.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 222 SRSHHLHIYHPHCTPLPKFVN 160
++ HH H PH P P F N
Sbjct: 166 TQHHHPHTRPPHHPPHPHFHN 186
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 23.0 bits (47), Expect = 9.3
Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Frame = -3
Query: 261 GVAYFAHQRNLSW-SRSHHLHIYHPHCTP 178
G+ F H N S HH H H C P
Sbjct: 467 GILAFNHGHNHDHGSHHHHSHSNHSMCLP 495
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,250,592
Number of Sequences: 5004
Number of extensions: 22161
Number of successful extensions: 89
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 71828050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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