Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C23
(293 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0551 + 4446937-4447353,4449141-4450013,4451206-4451244,445... 30 0.28
01_05_0747 - 24857965-24858393,24858502-24860063,24860176-24860245 29 0.49
07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305 29 0.65
04_01_0249 - 3284107-3286377 29 0.65
05_07_0276 + 28899378-28899953,28900010-28901242 28 1.1
05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594 27 2.0
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 27 2.0
02_05_0400 + 28671562-28672219,28672365-28672441,28673679-286737... 27 2.6
01_01_0888 + 6990354-6991862,6991970-6992431 27 2.6
10_08_0764 + 20417562-20417729,20417981-20418071,20418175-204182... 27 3.5
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211... 27 3.5
03_05_0045 - 20220955-20221046,20221599-20221641,20221715-202217... 27 3.5
03_01_0139 - 1099805-1099897,1100637-1100714,1100790-1100843,110... 27 3.5
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 3.5
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 27 3.5
07_01_0022 - 146406-146498,146616-146693,146967-147020,147729-14... 26 4.6
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930... 26 4.6
06_03_1153 - 28047125-28047751 26 6.1
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 26 6.1
03_03_0110 - 14523712-14525183,14525482-14525749 26 6.1
01_05_0621 + 23756682-23757075,23757530-23757726,23757825-23758139 26 6.1
04_04_1701 + 35470535-35471170,35471254-35471403,35471745-354720... 25 8.0
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 25 8.0
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416... 25 8.0
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 25 8.0
>12_01_0551 +
4446937-4447353,4449141-4450013,4451206-4451244,
4452339-4452581
Length = 523
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 139 PPFPRLLFQPPDIFYFRLELMMLTVILDLCP-SRVRPSCRI 20
PP PR PP + R+ L+ VIL++ RVR CR+
Sbjct: 43 PPLPRPRPPPPAVEALRIRLVSKGVILEVAEVERVRRECRV 83
>01_05_0747 - 24857965-24858393,24858502-24860063,24860176-24860245
Length = 686
Score = 29.5 bits (63), Expect = 0.49
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 142 PEFGWSVNKFGQWSAVGVVDMEVVASAPRKISLVGKICDALIGIR 276
P F + +GQW + G + VA+ +S+VG AL+G +
Sbjct: 418 PIFCLELKIYGQWMSGGQRRLSKVANPSNHLSIVGNFVGALLGAK 462
>07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305
Length = 611
Score = 29.1 bits (62), Expect = 0.65
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 169 FGQWSAVGVVDMEVVASAPRKISLVGKICDALIG 270
+GQW + G + +VA+ +S+VG AL+G
Sbjct: 362 YGQWMSSGQRRLSMVANPSNHLSVVGNFVGALLG 395
>04_01_0249 - 3284107-3286377
Length = 756
Score = 29.1 bits (62), Expect = 0.65
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 154 WSVNKFGQWSAVGVVDMEVVASAPRKISLV 243
W N+F +W+ V V+ V S P+K LV
Sbjct: 52 WGANQFARWAPVTVLGTLSVGSTPQKEQLV 81
>05_07_0276 + 28899378-28899953,28900010-28901242
Length = 602
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 169 FGQWSAVGVVDMEVVASAPRKISLVGKICDALIGIR 276
+GQW + G + VA+ +++VG AL+G R
Sbjct: 339 YGQWMSGGERRLSKVANPSNHLAIVGNFVGALLGAR 374
>05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594
Length = 622
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 169 FGQWSAVGVVDMEVVASAPRKISLVGKICDALIG 270
+GQW + G + VA+ +S+VG AL+G
Sbjct: 381 YGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLG 414
>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
Length = 625
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 169 FGQWSAVGVVDMEVVASAPRKISLVGKICDALIG 270
+GQW + G + VA+ +S+VG AL+G
Sbjct: 386 YGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLG 419
>02_05_0400 +
28671562-28672219,28672365-28672441,28673679-28673730,
28673851-28674008
Length = 314
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 282 ATANPN*GVAYFAHQRNLSWSRSHHLHIYHPHC 184
A A P G+ + R L + +SHHL +H HC
Sbjct: 128 AFARPIRGIPVYNTSRPLPFLQSHHLQ-HHQHC 159
>01_01_0888 + 6990354-6991862,6991970-6992431
Length = 656
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 169 FGQWSAVGVVDMEVVASAPRKISLVGKICDALIG 270
+GQW + G + VA+ +S+VG AL+G
Sbjct: 386 YGQWISGGQRRLSRVANPSNHLSIVGNFVGALLG 419
>10_08_0764 +
20417562-20417729,20417981-20418071,20418175-20418227,
20418259-20418417,20418493-20418564,20419186-20419258,
20419642-20419687,20420173-20420236,20420321-20420374,
20420430-20420540,20420924-20421016
Length = 327
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 109 VVGIIAVETAVPEFGWSVNK 168
+V +I +E VPE+GW+ K
Sbjct: 56 LVQLIRIECRVPEYGWTTQK 75
>06_03_1114 +
27719099-27719252,27719340-27719570,27720508-27721148,
27721225-27722124
Length = 641
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 231 LSWSRSHHLHIYHPHCTPLPKFVN-TPAKFWNRRFHGY 121
L W+ S++L + P P F+N A+FW R +
Sbjct: 149 LKWNGSNYLGVVWPGNVSFPDFLNPRAAEFWAREIAAF 186
>03_05_0045 -
20220955-20221046,20221599-20221641,20221715-20221792,
20222401-20222454,20222766-20222829,20222915-20222960,
20223049-20223121,20223530-20223601,20224023-20224075,
20224149-20224239,20226459-20226650
Length = 285
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 109 VVGIIAVETAVPEFGWSVNK 168
+V +I ++ VPEFGW+ K
Sbjct: 64 LVQLIRIQLRVPEFGWTTQK 83
>03_01_0139 -
1099805-1099897,1100637-1100714,1100790-1100843,
1100926-1100989,1101232-1101277,1101555-1101627,
1102199-1102270,1102349-1102441,1102539-1102591,
1102684-1102774,1103039-1103167
Length = 281
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 109 VVGIIAVETAVPEFGWSVNK 168
+V +I +E VPE+GW+ K
Sbjct: 43 LVQLIRIECRVPEYGWTTQK 62
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 124 LLFQPPDIFYFRLELMMLTVILDLCPSRVRPSCRIPAARGI 2
L F PP++F R + L + LC R P R+ A I
Sbjct: 562 LRFFPPELFSGRSGFVTLDLFAQLCRERRYPYIRLDGATSI 602
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 251 ILPTSEIFLGAEATTSISTTPTALH 177
+LP S +F+ ATT+ +T P LH
Sbjct: 442 LLPQSVVFMPPSATTTTTTIPPWLH 466
>07_01_0022 -
146406-146498,146616-146693,146967-147020,147729-147792,
147900-148018,148207-148278,148544-148596,148746-148836,
148956-149099
Length = 255
Score = 26.2 bits (55), Expect = 4.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 109 VVGIIAVETAVPEFGWSVNK 168
++ +I ++ VPEFGW+ K
Sbjct: 48 LIQLIRIQRRVPEFGWTTQK 67
>03_02_0538 +
9299639-9300046,9300362-9300509,9300648-9300652,
9302886-9303290,9303379-9304608
Length = 731
Score = 26.2 bits (55), Expect = 4.6
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -1
Query: 287 LERQRIPIRASHILPTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIP 114
++ +I I AS +P + L + TAL NL Q N G AV +IP
Sbjct: 506 VDENKITIGASGAIPALVLLLSNGSQRGKRDAATALF--NLCIYQGNKGKAVRAGLIP 561
>06_03_1153 - 28047125-28047751
Length = 208
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 139 PPFPRLLFQPPDIFYF 92
PP P + + PPD+ YF
Sbjct: 24 PPPPPIFYSPPDVSYF 39
>06_03_1108 -
27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 231 LSWSRSHHLHIYHPHCTPLPKFVN-TPAKFWNRRFHGY 121
L W+ S++L + P P F+N A+FW R +
Sbjct: 473 LKWNGSNYLGVVWPGNVYFPDFLNPRAAEFWAREIAAF 510
>03_03_0110 - 14523712-14525183,14525482-14525749
Length = 579
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 157 SVNKFGQWSAVGVVDMEVVASAPRKISLVG 246
++N FG +A GV+ E++ A R+IS G
Sbjct: 207 AMNLFGDPAAEGVIPTEILEEARREISQSG 236
>01_05_0621 + 23756682-23757075,23757530-23757726,23757825-23758139
Length = 301
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 288 VGATANPN*GVAYFAHQRNLSWSRSHHLHIYHPHCTPL 175
VGA+ P V Q+ S H H +H HCTPL
Sbjct: 253 VGASGRPFFPVVLMEQQQQAS-----HGHGHHHHCTPL 285
>04_04_1701 +
35470535-35471170,35471254-35471403,35471745-35472015,
35472152-35472262,35472476-35472650,35472748-35473020,
35473251-35473494,35473623-35473708,35473752-35473968
Length = 720
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 219 RSHHLHIYHPHC-TPLPKFVNTPAKFWNRRFHGYYSN 112
R H + P C PLPK P ++ N R +Y+N
Sbjct: 181 RERHCPQHPPTCLVPLPKGYTNPIRWPNSRDQIWYNN 217
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 25.4 bits (53), Expect = 8.0
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = -1
Query: 269 PIRASHILPTSEIFLGAEAT--TSISTTPTAL----HCPNLLTLQPNSGTAVSTAIIP 114
P++AS PT + A + TS T +AL H PN T +P S T IIP
Sbjct: 612 PVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPNGTTSEPKSNTLEPRRIIP 669
>03_02_0693 -
10441253-10441294,10441404-10441511,10441594-10441677,
10441765-10443062,10443111-10444804,10444890-10444957,
10445057-10445186,10445292-10445415,10445551-10445711,
10446714-10446868
Length = 1287
Score = 25.4 bits (53), Expect = 8.0
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 287 LERQRIPIRASHILPT---SEIFLGAEATTSISTTPTAL 180
++R+R P+RA I PT SEIF A + S T L
Sbjct: 180 IQRERRPLRAMEIRPTLQNSEIFRPPNAANNDSKLETDL 218
>02_03_0300 + 17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 249 FAHQR---NLSWSRSHHLHIYHPHCTPLPK 169
+ H R LSW+ +H H+Y P TP P+
Sbjct: 1428 YTHSRPMGQLSWNTNHPGHVYEP-STPEPE 1456
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,924,511
Number of Sequences: 37544
Number of extensions: 166803
Number of successful extensions: 485
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 328462236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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