Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C23
(293 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 31 0.14
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 29 0.44
Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical pr... 28 1.0
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 1.3
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 1.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 1.8
Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 27 3.1
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 3.1
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 3.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 3.1
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 27 3.1
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 27 3.1
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 27 3.1
AC006632-4|AAK85475.1| 374|Caenorhabditis elegans Hypothetical ... 27 3.1
Z81521-3|CAB04225.1| 353|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 26 4.1
AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical ... 26 4.1
AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical ... 26 5.4
Z68318-5|CAA92694.1| 418|Caenorhabditis elegans Hypothetical pr... 25 7.1
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 25 7.1
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 25 7.1
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 25 7.1
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 25 7.1
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 25 7.1
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 25 9.4
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 25 9.4
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 25 9.4
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 25 9.4
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 25 9.4
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 260 ASHILPTSEIFLGAEATTSISTTPTALHCPNLLTLQPNS-GTAVSTAIIPTT 108
+S S L + ATT +++TPT T P S T+ +TA+I TT
Sbjct: 161 SSSTASVSSTILSSTATTMVTSTPTTEKSSTTTTSTPTSEATSTTTAMITTT 212
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 29.5 bits (63), Expect = 0.44
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 218 EATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
EAT + PT + P ++T + N T +TAIIP T
Sbjct: 287 EATAPATDPPTTMIPPAVVTTEANIITTEATAIIPKT 323
>Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical
protein F21D9.5 protein.
Length = 839
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 189 HCTPLPKFVNTPAKFWN-RRFHGYYSNHQTFSIL 91
H PLP F ++ F + HGYY NH +L
Sbjct: 579 HGVPLPSFPSSIKVFGSCTEMHGYYRNHSILILL 612
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 212 TTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
TT STTPT+ T +P + T+ ST+ TT
Sbjct: 601 TTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 212 TTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
TT STTPT+ T +P + T+ ST+ TT
Sbjct: 601 TTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 257 SHILPTSEIFLGAEATTSISTTPTALHCPNL--LTLQPNSGTAVSTAIIPTT 108
S I P+++ + ++S ++TPT P TL +S T VST I P+T
Sbjct: 395 STIAPSTQGVPTSSKSSSPNSTPTTTITPGAPSSTLGSSSSTIVSTTITPST 446
>Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical
protein F53B6.6 protein.
Length = 610
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 263 RASHILPTSEIFLGAEATTSISTTPTALHCPNLLTLQP 150
R S I TSE + + T +T PT H P+ +T +P
Sbjct: 427 RDSPINDTSEDDIIMQVVTLRTTVPTVSHTPDFVTFKP 464
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 242 TSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIP 114
TS + ATTS++ P LH P+ LTL ++ + IP
Sbjct: 109 TSLWYASNMATTSLAALPW-LHAPSELTLMDRKNESIEVSWIP 150
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 212 TTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
TT+ +TTPT T P + T+ +T PTT
Sbjct: 227 TTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTT 261
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -1
Query: 245 PTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
PT+ TT +TTPT T + T +T PTT
Sbjct: 125 PTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTT 170
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -1
Query: 245 PTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
PT+ TT +TTPT P T P + T T PTT
Sbjct: 102 PTTTTETTTTPTTETTTTPTTT-TPTTTTTTPTT-TTTETTTTPTT 145
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = -1
Query: 251 ILPTSEIFLGAEATTSISTTPTA---LHCPNLLTLQPNSGTAVSTAIIPTT 108
+ PTS L +++ T+PTA L P + P S T TA + T
Sbjct: 620 LAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPT 670
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = -1
Query: 251 ILPTSEIFLGAEATTSISTTPTA---LHCPNLLTLQPNSGTAVSTAIIPTT 108
+ PTS L +++ T+PTA L P + P S T TA + T
Sbjct: 676 LAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPT 726
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3
Query: 183 TPLPKFVNTPAKFWNRRFH 127
TP P N PA FWN +
Sbjct: 855 TPAPTTTNKPANFWNNNLY 873
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3
Query: 183 TPLPKFVNTPAKFWNRRFH 127
TP P N PA FWN +
Sbjct: 868 TPAPTTTNKPANFWNNNLY 886
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 248 LPTSEIFLGAEATTSIST---TPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
+PTS + + TTS +T T TA P T +P T V+ + PTT
Sbjct: 293 MPTSSTEIPSTTTTSTTTTTSTTTATETPTTTTERPT--TTVTQVLDPTT 340
>AC006632-4|AAK85475.1| 374|Caenorhabditis elegans Hypothetical
protein F28A10.9 protein.
Length = 374
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 225 WSRSH-HLHIYHPHCTPLPKFVNTPAKFWNR 136
WS + H HI+ CTPL K + + WN+
Sbjct: 290 WSAADLHGHIFWFSCTPLEKILAEYGENWNK 320
>Z81521-3|CAB04225.1| 353|Caenorhabditis elegans Hypothetical
protein F32A11.3 protein.
Length = 353
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 207 LHIYHPHCTPLPKFVNTPAKFWNRRFHGYYS 115
+H+ P TP+P + P + F+ YYS
Sbjct: 186 IHVAAPVTTPIPTYSAPPVNYEAPVFNNYYS 216
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 213 HHLHIYHPHCTPLPKFVNTPAKFWNRRFHGYYSNHQTFS 97
HH + P C P P F P + H +++ H++FS
Sbjct: 433 HHFPPFWPPCPPPPPFW-PPHRRGGHCHHHHHNGHRSFS 470
>AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical
protein T07D3.5 protein.
Length = 263
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 204 HIYHPHCTPLPKFVNTPAKFW 142
HI+ CTPL K V +FW
Sbjct: 75 HIFWVSCTPLEKLVAEYGEFW 95
>AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical
protein Y34B4A.10 protein.
Length = 498
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 245 PTSEIFLGAEATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
PT+E TT+ISTTP + T P + +A+ +PTT
Sbjct: 280 PTTESATTPTTTTTISTTPL------VTTTPPTAQSAIVIKTLPTT 319
>Z68318-5|CAA92694.1| 418|Caenorhabditis elegans Hypothetical
protein T21B10.4 protein.
Length = 418
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 251 ILPTSEIFLGAE--ATTSISTTPTALHCPNLL 162
IL T++ FL ++ TSI T+ T HCP +
Sbjct: 30 ILETNQYFLVSQQDGITSIETSVTPGHCPQFM 61
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 209 TSISTTPTALHCPN 168
+S STTPT+ HCP+
Sbjct: 9 SSASTTPTSPHCPS 22
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 209 TSISTTPTALHCPN 168
+S STTPT+ HCP+
Sbjct: 9 SSASTTPTSPHCPS 22
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 209 TSISTTPTALHCPN 168
+S STTPT+ HCP+
Sbjct: 9 SSASTTPTSPHCPS 22
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 209 TSISTTPTALHCPN 168
+S STTPT+ HCP+
Sbjct: 51 SSASTTPTSPHCPS 64
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 209 TSISTTPTALHCPN 168
+S STTPT+ HCP+
Sbjct: 9 SSASTTPTSPHCPS 22
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 64 ILDLCPSRVRPSCRI 20
I D+CP+RV PS R+
Sbjct: 987 IQDICPTRVYPSIRV 1001
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 206 SISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
S+S P H P ++T+ PN +T P T
Sbjct: 323 SLSENPGQSHIPRMMTMPPNMPYPTATLPHPRT 355
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 206 SISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
S+S P H P ++T+ PN +T P T
Sbjct: 229 SLSENPGQSHIPRMMTMPPNMPYPTATLPHPRT 261
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 206 SISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
S+S P H P ++T+ PN +T P T
Sbjct: 323 SLSENPGQSHIPRMMTMPPNMPYPTATLPHPRT 355
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 204 HIYHPHCTPLPKFVNTPAKFWNRRFHGYYSNHQTFSI 94
H+ H + T L K + T N+R GYYS ++T I
Sbjct: 54 HLNH-NPTTLDKAMPTEHPDCNKRIIGYYSENETTDI 89
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 215 ATTSISTTPTALHCPNLLTLQPNSGTAVSTAII 117
ATT STTP+A + P L S TA A +
Sbjct: 130 ATTQASTTPSAPNPPGGLPAPSASATAAVAAAV 162
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 215 ATTSISTTPTALHCPNLLTLQPNSGTAVSTAII 117
ATT STTP+A + P L S TA A +
Sbjct: 127 ATTQASTTPSAPNPPGGLPAPSASATAAVAAAV 159
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 206 SISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
S+S P H P ++T+ PN +T P T
Sbjct: 229 SLSENPGQSHIPRMMTMPPNMPYPTATLPHPRT 261
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 25.0 bits (52), Expect = 9.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 284 ERQRIPIRASHILPTSEIFLGA-EATTSISTTPTALHCPNLLTLQPNSGTAVSTAIIPTT 108
E+Q R +L S+I G A TS P + PN+ + + T S++ +PTT
Sbjct: 1548 EQQEFQTRYIDVLILSKIVTGTVSARTSFPKKPP-IPPPNIRDRERDRETGTSSSALPTT 1606
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,100,916
Number of Sequences: 27780
Number of extensions: 131209
Number of successful extensions: 485
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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