Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C22
(282 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0433 - 18169930-18170029,18171183-18171307,18172192-181723... 29 0.55
06_01_0746 + 5580755-5582119 29 0.73
03_06_0106 - 31682200-31682775 29 0.73
06_03_0608 + 22705321-22705652,22705809-22706178,22706264-227066... 27 1.7
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325... 27 1.7
03_06_0772 - 36162537-36162745,36163131-36163171,36163316-361636... 27 1.7
10_08_0035 - 14321699-14321751,14321800-14321914,14322136-143221... 27 2.2
04_04_0500 - 25677767-25680850 27 3.0
06_01_0160 - 1205454-1205482,1205647-1205732,1205903-1205956,120... 26 3.9
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 26 3.9
03_05_0375 + 23594977-23595045,23595471-23595926 26 3.9
02_01_0468 + 3357043-3357226,3357695-3358155 26 3.9
01_06_1471 - 37588330-37588599 26 3.9
01_06_0061 - 26071984-26072343,26072792-26073139,26073228-260733... 26 3.9
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 26 5.2
06_03_0678 + 23459752-23460379,23460993-23461068,23461146-234612... 26 5.2
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 26 5.2
01_05_0772 + 25056973-25057285,25057678-25058006,25058113-250583... 26 5.2
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 25 6.8
07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709 25 6.8
03_06_0728 + 35768830-35769324,35769404-35769462,35770440-357705... 25 6.8
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 25 6.8
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 25 6.8
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 25 6.8
06_01_0849 - 6469308-6469838,6469859-6470320 25 9.0
03_02_0187 - 6248226-6249226,6249296-6250148 25 9.0
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13... 25 9.0
>07_03_0433 -
18169930-18170029,18171183-18171307,18172192-18172358,
18173027-18173081,18173409-18173491,18173493-18173622,
18174482-18174691
Length = 289
Score = 29.1 bits (62), Expect = 0.55
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +2
Query: 47 RIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPE 190
R+GT PPC + A AA R GP A A T G PE
Sbjct: 26 RVGTPAPQPPCRGFSKASAAAAASSR---GPAAAAATTTATAAGARPE 70
>06_01_0746 + 5580755-5582119
Length = 454
Score = 28.7 bits (61), Expect = 0.73
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +2
Query: 53 GTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMG 178
G L P +RR H +ARA L A APV V G+G
Sbjct: 40 GRGLAMPEIVRRMAH-RARARRRLLSAAEAAPVRARVRAGLG 80
>03_06_0106 - 31682200-31682775
Length = 191
Score = 28.7 bits (61), Expect = 0.73
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 154 GHRCNWPRRQPFLRRTCLYMSRTAQAWRRNKLGTDP--FRLGLEGGCARSR 8
GHR + R +P R + ++ RR++LG P + G GGCA R
Sbjct: 50 GHRLHCLRPRPLPSRIVPTEAMEGRSKRRHRLGKPPPDLQAGAVGGCADGR 100
>06_03_0608 +
22705321-22705652,22705809-22706178,22706264-22706656,
22707183-22707204,22707257-22707928,22708019-22708494
Length = 754
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = +2
Query: 71 PPCLRRATHVKARAAEERLPAGP----IAPVAPTVPVGMGNHPEASH 199
PPC R + A RLP A + P P G HP ASH
Sbjct: 40 PPCTRLLLPEQPWGAAARLPLSEPSWGTAALPPEPPWGAAAHPPASH 86
>05_01_0413 -
3253345-3253461,3253595-3253666,3253763-3253876,
3254050-3254163,3254420-3254520,3254616-3254694,
3254789-3254863,3254955-3255017,3255281-3255361,
3255449-3255574,3255898-3256022,3256722-3256839,
3257420-3257554,3258029-3258175,3259016-3259321
Length = 590
Score = 27.5 bits (58), Expect = 1.7
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 80 LRRATHVKARAAEERLPAGPIAPVAPTVPVG--MGNHPEASHAAKEALKSRI 229
+RRA V ARAA E AG V +G +G H A HA +E LK+ I
Sbjct: 58 VRRAA-VAARAAAENGVAGSGGFDYDLVIIGAGVGGHGAALHAVEEGLKTAI 108
>03_06_0772 -
36162537-36162745,36163131-36163171,36163316-36163600,
36163710-36163813,36163924-36164021,36165039-36165213,
36166429-36166578,36167113-36167193,36167246-36167299,
36167422-36167679
Length = 484
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 184 MVSHPHRHSWGHRCNWPRRQPFLRRTCLYMSRT--AQAWRRNKLGTDPFRLGLEGGCARS 11
M S PH+ + + +W R+ R + S + A+ R KL P + LEGGC+
Sbjct: 131 MYSGPHKDAVAY-ADWLRKDHRFRDLLVQTSPSLCGHAFPRLKLRYKPSLVQLEGGCSHL 189
Query: 10 RLV 2
LV
Sbjct: 190 PLV 192
>10_08_0035 -
14321699-14321751,14321800-14321914,14322136-14322199,
14322221-14322238,14323433-14323524,14323580-14323601,
14324345-14324424,14324882-14325082
Length = 214
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 102 RHVRRRNGCLRGQLHLWPQLCLWGWETIRRQAMLPRRR*K 221
R RRR+ + GQL L P L+ + R ++P RR K
Sbjct: 11 RRRRRRSAAIGGQLLLPPLFWLFPLSPLSRPMVMPARRGK 50
>04_04_0500 - 25677767-25680850
Length = 1027
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 101 KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAA 205
K RA + P P +AP +G+HP+AS A
Sbjct: 12 KPRANQPPPPPPPPFRLAPAAVAALGSHPDASSYA 46
>06_01_0160 -
1205454-1205482,1205647-1205732,1205903-1205956,
1206035-1206130,1207332-1207448,1207834-1207952
Length = 166
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = -3
Query: 172 PHRHSWGHRCNWPRRQPFLRRT-CL 101
PH H W R WP LRR CL
Sbjct: 74 PHLHRWYSRLRWPLLAGRLRRVGCL 98
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 62 LIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEA 193
L PPP L H+ R A E+ P VA P + H E+
Sbjct: 172 LPPPPPLPPQDHIPERLAVEKSPMDVEPAVASESPEQLQEHAES 215
>03_05_0375 + 23594977-23595045,23595471-23595926
Length = 174
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 172 PHRHSWGHRC-NWPRRQPFLRRTCLYMSRTAQAWRRN 65
P HSW NWPR +PF R + + A W N
Sbjct: 11 PSSHSWHVGFWNWPRCRPFHRSSVVDGCGVAGPWDDN 47
>02_01_0468 + 3357043-3357226,3357695-3358155
Length = 214
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 128 PAGPIAPVAPTVPVGMGNHPEASHAAKEALKS 223
PAG P AP P G + P AA KS
Sbjct: 157 PAGQAPPGAPATPAGTNSSPANGGAAGGGAKS 188
>01_06_1471 - 37588330-37588599
Length = 89
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 62 LIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAA 205
L P PC+R H + GP AP P+ P G G+ A A+
Sbjct: 14 LPPSPCIR---HQRRGGMGAAATTGPAAPPLPSFPGGDGSARAADLAS 58
>01_06_0061 -
26071984-26072343,26072792-26073139,26073228-26073371,
26073454-26073723,26075019-26075825
Length = 642
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 65 IPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV 169
+PP R +AR+A LP+ P APV+ P+
Sbjct: 14 LPPRAGLRLPLPRARSARVSLPSSPAAPVSLQSPL 48
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 25.8 bits (54), Expect = 5.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 56 TQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEAS 196
T L+PPP A+ PAGP A VA + G+HP A+
Sbjct: 18 TSLLPPP---------PGASASLAPAGPAAAVARQIRRNDGHHPGAA 55
>06_03_0678 +
23459752-23460379,23460993-23461068,23461146-23461261,
23462425-23462939
Length = 444
Score = 25.8 bits (54), Expect = 5.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +3
Query: 144 HLWPQLCLWGWETIRRQAML 203
H + + C+WGW+ + R ++
Sbjct: 282 HQFIEYCIWGWDNLPRTVLM 301
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 101 KARAAEERLPAGPIAPVAPTVPVGMGNHPE 190
K +ERL GP P AP VP P+
Sbjct: 173 KIARRDERLAQGPREPAAPAVPAQTAAAPK 202
>01_05_0772 +
25056973-25057285,25057678-25058006,25058113-25058360,
25058481-25059396
Length = 601
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 281 FFFFFLRLISVLLNQIIIFYFLAPPWQH 198
F+F + SVLL ++ + P WQH
Sbjct: 370 FYFAGMETTSVLLTWTLVVLSMHPEWQH 397
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 125 LPAGPIAPVAPTVPVGMGNHPEASHAA 205
L GP+ A +P G+G A HAA
Sbjct: 308 LTGGPVGSAAMRLPAGIGGLDGAMHAA 334
>07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709
Length = 191
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 44 ERIGTQLIPPPCLRRAT 94
+R+GT+L+PP L+RA+
Sbjct: 66 KRVGTRLLPPDPLKRAS 82
>03_06_0728 +
35768830-35769324,35769404-35769462,35770440-35770509,
35770626-35770748,35770836-35770964,35771268-35771717
Length = 441
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 143 APVAPTVPVGMGNHPEASHAAKEALKSR 226
AP APT G HPE A+ + KSR
Sbjct: 36 APPAPTAAAPRGKHPE-PEVAEPSAKSR 62
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 51 SVPSLFLRHACAVRLM*RHVRRRNGCLRGQLHLWPQLCLWGW 176
S+ +L L ACA+ + R R +RG HL + GW
Sbjct: 778 SIATLGLLIACALPVFFRVTTARRSFVRGPFHLGKYGVIVGW 819
>01_05_0687 +
24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 25.4 bits (53), Expect = 6.8
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Frame = +2
Query: 65 IPPPCLRRATHVKARAAEERLP-------AGPIAPVA--PTVPVGMGNHPEASHAA 205
IPPP +AT RA E + P AGP AP + P++ +G P A AA
Sbjct: 55 IPPPSPGQATEGWPRAEEPQPPIGGTPGAAGPPAPPSFFPSLELGTSAAPPALEAA 110
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 25.4 bits (53), Expect = 6.8
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 44 ERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVG--MGNHPEASHAAKEAL 217
E +G + + P AT KA AA AG V +G +G H A HA ++ L
Sbjct: 39 EALGLRSLRAPPRAAATPRKAAAATGNGAAGSGGFDYDLVIIGAGVGGHGAALHAVEKGL 98
Query: 218 KSRI 229
K+ I
Sbjct: 99 KTAI 102
>06_01_0849 - 6469308-6469838,6469859-6470320
Length = 330
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 56 TQLIPPPCLRRATHVKARAA--EERLPAGPIAPVA 154
++L+ PPCL ATH + + RL +G P A
Sbjct: 10 SRLLQPPCLTAATHANSLLSLHLRRLLSGAAEPFA 44
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 65 IPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV-GMGNHPEASHA 202
+PPP L + V + P+ AP++P+ V + +HP A
Sbjct: 37 LPPPLLAQKVQVWPKPTSISWPSAVYAPLSPSFSVRAVLSHPSLRQA 83
>03_01_0016 +
131141-131236,131743-132043,132125-132341,132440-132773,
132883-132996,133065-133193,133293-133469,133555-133746,
134844-134981,135327-135559,135900-136003,136633-136727,
136817-137053,137801-137922,138252-138354,138750-138826,
138909-139017,139107-139253,139953-140000,140292-140492,
140589-140738,140917-141002,141088-141193,141278-141373,
141759-141911,142647-142819,142923-142986,144056-144193,
144548-144595,144690-144836,144907-144968,146540-146645,
147357-147461,147548-147679,147765-147974,148070-148171,
148261-148398
Length = 1729
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 226 STF*RLLGSMACLRMVSHPHRHSWGHR 146
S+F L + ++HPH HS HR
Sbjct: 804 SSFFALAADFHDMTSITHPHHHSPSHR 830
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,773,929
Number of Sequences: 37544
Number of extensions: 150591
Number of successful extensions: 695
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 279801164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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