BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C22
(282 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118371-1|AAM48400.1| 676|Drosophila melanogaster RE13854p pro... 30 0.50
AE014298-2438|AAF48635.1| 676|Drosophila melanogaster CG4521-PA... 30 0.50
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro... 29 1.2
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC... 29 1.2
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA... 29 1.2
BT023552-1|AAY84952.1| 317|Drosophila melanogaster IP09780p pro... 28 2.0
BT011008-1|AAR27879.1| 706|Drosophila melanogaster AT12204p pro... 28 2.0
AE014298-1732|AAF48124.1| 706|Drosophila melanogaster CG18130-P... 28 2.0
AE014297-600|AAF54028.2| 269|Drosophila melanogaster CG31496-PA... 28 2.0
AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p pro... 27 3.6
AY119197-1|AAM51057.1| 189|Drosophila melanogaster SD12705p pro... 27 3.6
AY069255-1|AAL39400.1| 966|Drosophila melanogaster GM03058p pro... 27 3.6
AF188718-1|AAF05593.1| 966|Drosophila melanogaster alanyl-tRNA ... 27 3.6
AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA... 27 3.6
AE014134-1481|AAS64737.1| 966|Drosophila melanogaster CG13391-P... 27 3.6
AE014134-1480|AAF52657.1| 966|Drosophila melanogaster CG13391-P... 27 3.6
AF121361-3|AAD37505.1| 277|Drosophila melanogaster zinc finger ... 27 4.7
AF121360-1|AAD34351.1| 277|Drosophila melanogaster DNZDHHC/NEW1... 27 4.7
BT001688-1|AAN71443.1| 235|Drosophila melanogaster RE58281p pro... 26 6.2
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 26 6.2
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 26 6.2
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 26 6.2
BT003537-1|AAO39541.1| 506|Drosophila melanogaster RE06930p pro... 26 8.2
AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH0878... 26 8.2
AE014298-2485|AAF48670.1| 480|Drosophila melanogaster CG13005-P... 26 8.2
AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB... 26 8.2
AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA... 26 8.2
>AY118371-1|AAM48400.1| 676|Drosophila melanogaster RE13854p
protein.
Length = 676
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 89 ATHVKARAAEERLPA-GPIAPVAPTV 163
ATH+ + AE+ +P PIAPVAP V
Sbjct: 645 ATHMPSNPAEDEVPEKAPIAPVAPIV 670
>AE014298-2438|AAF48635.1| 676|Drosophila melanogaster CG4521-PA
protein.
Length = 676
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 89 ATHVKARAAEERLPA-GPIAPVAPTV 163
ATH+ + AE+ +P PIAPVAP V
Sbjct: 645 ATHMPSNPAEDEVPEKAPIAPVAPIV 670
>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p protein.
Length = 1664
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 68 PPPCLRRATHVKARAAEERLPAGPIAPVAP 157
PPP + A+H++ R +R+P P A P
Sbjct: 1105 PPPKGKSASHLQFRGKNDRIPTSPPATAPP 1134
>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
isoform C protein.
Length = 1664
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 68 PPPCLRRATHVKARAAEERLPAGPIAPVAP 157
PPP + A+H++ R +R+P P A P
Sbjct: 1105 PPPKGKSASHLQFRGKNDRIPTSPPATAPP 1134
>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
isoform A protein.
Length = 1674
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 68 PPPCLRRATHVKARAAEERLPAGPIAPVAP 157
PPP + A+H++ R +R+P P A P
Sbjct: 1115 PPPKGKSASHLQFRGKNDRIPTSPPATAPP 1144
>BT023552-1|AAY84952.1| 317|Drosophila melanogaster IP09780p
protein.
Length = 317
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 68 PPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV 169
P P + A A PA P+AP AP PV
Sbjct: 186 PSPVFPAVSPAAAPANVAPAPAAPVAPAAPAAPV 219
>BT011008-1|AAR27879.1| 706|Drosophila melanogaster AT12204p
protein.
Length = 706
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 104 ARAAEERLPAGPIAPVA--PTVPVGMGNHPEA 193
A AA E PAG APVA P P G PEA
Sbjct: 619 APAAAEAPPAGDAAPVAPPPAEPAAEGAAPEA 650
>AE014298-1732|AAF48124.1| 706|Drosophila melanogaster CG18130-PA
protein.
Length = 706
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 104 ARAAEERLPAGPIAPVA--PTVPVGMGNHPEA 193
A AA E PAG APVA P P G PEA
Sbjct: 619 APAAAEAPPAGDAAPVAPPPAEPAAEGAAPEA 650
>AE014297-600|AAF54028.2| 269|Drosophila melanogaster CG31496-PA
protein.
Length = 269
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 68 PPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV 169
P P + A A PA P+AP AP PV
Sbjct: 138 PSPVFPAVSPAAAPANVAPAPAAPVAPAAPAAPV 171
>AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p
protein.
Length = 170
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +2
Query: 47 RIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHP 187
R G PPP RR V+ARA PA APV P + P
Sbjct: 3 RRGRSASPPPSTRRTAPVQARA-----PAPAPAPVQTRAPAPAASAP 44
>AY119197-1|AAM51057.1| 189|Drosophila melanogaster SD12705p
protein.
Length = 189
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 214 RLLGSMACLRMVSHPHRHSWGHR 146
R LGS +C+ +S P + W H+
Sbjct: 24 RRLGSRSCIVRISEPIKSEWAHK 46
>AY069255-1|AAL39400.1| 966|Drosophila melanogaster GM03058p
protein.
Length = 966
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 156 QLCLWGWETIRRQAMLPRRR*KVEY 230
++C W WE + ++ LP+ R V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136
>AF188718-1|AAF05593.1| 966|Drosophila melanogaster alanyl-tRNA
synthetase protein.
Length = 966
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 156 QLCLWGWETIRRQAMLPRRR*KVEY 230
++C W WE + ++ LP+ R V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136
>AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA
protein.
Length = 170
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +2
Query: 47 RIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHP 187
R G PPP RR V+ARA PA APV P + P
Sbjct: 3 RRGRSASPPPSTRRTAPVQARA-----PAPAPAPVQTRAPAPAASAP 44
>AE014134-1481|AAS64737.1| 966|Drosophila melanogaster CG13391-PB,
isoform B protein.
Length = 966
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 156 QLCLWGWETIRRQAMLPRRR*KVEY 230
++C W WE + ++ LP+ R V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136
>AE014134-1480|AAF52657.1| 966|Drosophila melanogaster CG13391-PA,
isoform A protein.
Length = 966
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 156 QLCLWGWETIRRQAMLPRRR*KVEY 230
++C W WE + ++ LP+ R V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136
>AF121361-3|AAD37505.1| 277|Drosophila melanogaster zinc finger
protein protein.
Length = 277
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -3
Query: 190 LRMVSHPHRHSWGHRCNWPRRQPFLRRTCLYMSRTAQAWRRNKLGTDPFRLGLEGGCAR 14
LRM+ + ++ RC+ +P +C+ T + WRR ++G C R
Sbjct: 185 LRMIHSGYPYAGVRRCSACSLRPSWWTSCMRFCTTRRPWRRYSRRAPIVQIGASTSCWR 243
>AF121360-1|AAD34351.1| 277|Drosophila melanogaster DNZDHHC/NEW1
zinc finger protein11 protein.
Length = 277
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -3
Query: 190 LRMVSHPHRHSWGHRCNWPRRQPFLRRTCLYMSRTAQAWRRNKLGTDPFRLGLEGGCAR 14
LRM+ + ++ RC+ +P +C+ T + WRR ++G C R
Sbjct: 185 LRMIHSGYPYAGVRRCSACSLRPSWWTSCMRFCTTRRPWRRYSRRAPIVQIGASTSCWR 243
>BT001688-1|AAN71443.1| 235|Drosophila melanogaster RE58281p
protein.
Length = 235
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 178 SHPHRHSWGHRCNWPRRQPFLRRT 107
S H + H +W RRQP RRT
Sbjct: 129 SSSHNSNSNHGNSWRRRQPLRRRT 152
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p
protein.
Length = 2176
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 101 KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEALKSRI 229
K + E P PIAPV PT SHA ++A+ +R+
Sbjct: 166 KEKVKEVLPPVVPIAPVTPT----CNRVTRKSHAQEQAINTRV 204
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 101 KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEALKSRI 229
K + E P PIAPV PT SHA ++A+ +R+
Sbjct: 290 KEKVKEVLPPVVPIAPVTPT----CNRVTRKSHAQEQAINTRV 328
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 101 KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEALKSRI 229
K + E P PIAPV PT SHA ++A+ +R+
Sbjct: 290 KEKVKEVLPPVVPIAPVTPT----CNRVTRKSHAQEQAINTRV 328
>BT003537-1|AAO39541.1| 506|Drosophila melanogaster RE06930p
protein.
Length = 506
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 21 HPPSSPSLNGSVPSLFLRHA 80
HPPS+PSL G + + RH+
Sbjct: 303 HPPSTPSLFGLLTAQLQRHS 322
>AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH08789
protein.
Length = 499
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 LIPPPCLRRATHVKARAAEERLPAGPIAPVAP-TVPVGMGNHPEASHAAKEALKSR 226
L P + R+ +K A R A P P P + P NHP A+H E+ R
Sbjct: 184 LFKTPAVDRS--LKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPR 237
>AE014298-2485|AAF48670.1| 480|Drosophila melanogaster CG13005-PA
protein.
Length = 480
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 21 HPPSSPSLNGSVPSLFLRHA 80
HPPS+PSL G + + RH+
Sbjct: 277 HPPSTPSLFGLLTAQLQRHS 296
>AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB,
isoform B protein.
Length = 499
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 LIPPPCLRRATHVKARAAEERLPAGPIAPVAP-TVPVGMGNHPEASHAAKEALKSR 226
L P + R+ +K A R A P P P + P NHP A+H E+ R
Sbjct: 184 LFKTPAVDRS--LKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPR 237
>AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA,
isoform A protein.
Length = 908
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 LIPPPCLRRATHVKARAAEERLPAGPIAPVAP-TVPVGMGNHPEASHAAKEALKSR 226
L P + R+ +K A R A P P P + P NHP A+H E+ R
Sbjct: 593 LFKTPAVDRS--LKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPR 646
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,937,655
Number of Sequences: 53049
Number of extensions: 224457
Number of successful extensions: 917
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -