Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C19
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 294 2e-79
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 294 2e-79
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 294 2e-79
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 294 2e-79
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 289 4e-78
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 38 0.038
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 4.3
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 4.3
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 4.3
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 4.3
BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2 prot... 31 4.3
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 294 bits (721), Expect = 2e-79
Identities = 139/159 (87%), Positives = 147/159 (92%)
Frame = +2
Query: 107 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 466
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 467 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAALETSK 583
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAA K
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 167
Score = 37.5 bits (83), Expect = 0.038
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 568 FRNIKTIAECVADELIN 618
FRNIKTIAEC+ADELIN
Sbjct: 163 FRNIKTIAECLADELIN 179
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 294 bits (721), Expect = 2e-79
Identities = 139/159 (87%), Positives = 147/159 (92%)
Frame = +2
Query: 107 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 466
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 467 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAALETSK 583
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAA K
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 167
Score = 37.5 bits (83), Expect = 0.038
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 568 FRNIKTIAECVADELIN 618
FRNIKTIAEC+ADELIN
Sbjct: 163 FRNIKTIAECLADELIN 179
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 294 bits (721), Expect = 2e-79
Identities = 139/159 (87%), Positives = 147/159 (92%)
Frame = +2
Query: 107 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 466
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 467 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAALETSK 583
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAA K
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 167
Score = 37.5 bits (83), Expect = 0.038
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 568 FRNIKTIAECVADELIN 618
FRNIKTIAEC+ADELIN
Sbjct: 163 FRNIKTIAECLADELIN 179
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 294 bits (721), Expect = 2e-79
Identities = 139/159 (87%), Positives = 147/159 (92%)
Frame = +2
Query: 107 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 466
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 467 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAALETSK 583
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAA K
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 167
Score = 37.5 bits (83), Expect = 0.038
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 568 FRNIKTIAECVADELIN 618
FRNIKTIAEC+ADELIN
Sbjct: 163 FRNIKTIAECLADELIN 179
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 289 bits (710), Expect = 4e-78
Identities = 137/159 (86%), Positives = 145/159 (91%)
Frame = +2
Query: 107 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 466
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 467 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAALETSK 583
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAA K
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 167
Score = 37.5 bits (83), Expect = 0.038
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 568 FRNIKTIAECVADELIN 618
FRNIKTIAEC+ADELIN
Sbjct: 163 FRNIKTIAECLADELIN 179
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 272 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 427
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 37.5 bits (83), Expect = 0.038
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 568 FRNIKTIAECVADELIN 618
FRNIKTIAEC+ADELIN
Sbjct: 14 FRNIKTIAECLADELIN 30
Score = 33.1 bits (72), Expect = 0.81
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 530 AIWLLCTGAREAALETSK 583
AIWLLCTGAREAA K
Sbjct: 1 AIWLLCTGAREAAFRNIK 18
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 188 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 188 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 188 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 188 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2
protein.
Length = 380
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 39 WLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKS 134
++ +TGPKK P + W CH RL++ K+
Sbjct: 261 FMEKTGPKKEPFKKRWFALDCH-ERRLLYYKN 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,238,988
Number of Sequences: 237096
Number of extensions: 2086493
Number of successful extensions: 7855
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7855
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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