Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C15
(370 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 69 4e-12
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 68 1e-11
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 68 1e-11
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 68 1e-11
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 68 1e-11
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 68 1e-11
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 50 3e-06
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 32 0.50
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LEDKRK KA +++L ++ K+A + V K
Sbjct: 68 LKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 127
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 128 IDKYTEVLKTHG 139
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 37 ALDRLKVFDGIPPPYD 52
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 127 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 186
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 187 IDKYTEVLKTHG 198
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 96 ALDRLKVFDGIPPPYD 111
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 68 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 127
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 128 IDKYTEVLKTHG 139
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 37 ALDRLKVFDGIPPPYD 52
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 290
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A + V K
Sbjct: 129 LKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKK 188
Query: 291 TAPFTTVVQSYG 326
+T V++++G
Sbjct: 189 IDKYTEVLKTHG 200
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 14 ALRRLRTYDGCPPPFD 61
AL RL+ +DG PPP+D
Sbjct: 98 ALDRLKVFDGIPPPYD 113
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 111 LKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERK-LKKITKEAGEKVAK 287
LKP RK+ +GR + EV WKY+ V LE+KRK KA K+ +++K L ++ K+A + V K
Sbjct: 43 LKPTRKFALLGRQAQEVRWKYQAVTATLEEKRKEKA-KIHYWKKKQLMRLRKQAEKNVKK 101
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 129 YCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKV 281
Y R S E+ K RDV+ LEDK KV ++ + E++ KK+ E +V
Sbjct: 501 YDFQARNSSELSVKQRDVLEVLEDKEKVSELEAV-MEKQKKKVEGEVEMEV 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,513,298
Number of Sequences: 237096
Number of extensions: 936552
Number of successful extensions: 2501
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2501
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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