Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_C13
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    25   0.34 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.34 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.59 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.0  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.4  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   7.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.2  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 266 CNVVYSNSWR*ASLLRPREVLDPARRRSSLCC 171
           CN+V  +       + P  ++D +RRRSSL C
Sbjct: 359 CNIVSCSP----QTVHPETIIDVSRRRSSLIC 386



 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 221 RPREVLDPARRRSSLCCQHISRVLFSVRIAMV 126
           R RE     R+R     +HI+ V +  ++A +
Sbjct: 443 RQREAAGNCRKRGEKIARHINSVSYIDKVARI 474


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
 Frame = +2

Query: 266 MDLVSLETSDEN--EWVKARIIQDKVKYIWTSGRLCDF-KGCNRP-----DLLPNEVNGW 421
           + +V L+T+ E   EW K     +     W      +F KG N       D+  N VN W
Sbjct: 13  VSVVLLDTTQEEKLEWTKYPFGAEANTPGWVEESFTNFDKGINWRSYVVCDVAYNNVNNW 72

Query: 422 FWTAELQK 445
            WT  +++
Sbjct: 73  LWTPFIER 80


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
 Frame = +2

Query: 209 LRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIIQ------DKVK--YIWTSGRL 364
           ++ +E+    A+    +  +DLV   TSD+++W +  I        +K K  YIW    +
Sbjct: 97  IKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIWVD-PV 155

Query: 365 CDFKGCNRPDLLPNE----VNGWFWT 430
            D KG    D  PN      NG  WT
Sbjct: 156 KDDKGNPIKDKYPNNWLSVFNGTGWT 181


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 266 MDLVSLETSDENEWVK---ARIIQDKVKYIWTSGRLCDFK 376
           +D V   TSD++EW +     I      YIW  G++ + K
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 266 MDLVSLETSDENEWVK---ARIIQDKVKYIWTSGRLCDFK 376
           +D V   TSD++EW +     I      YIW  G++ + K
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 404 NEVNGWFWTAELQKLA 451
           NE+N W+W  ++  L+
Sbjct: 361 NEMNKWWWNMKISNLS 376


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 261 VAWTSFLWKPATKMNGLKLASFRT 332
           V W   +W+P +     K  +F+T
Sbjct: 112 VDWLKNMWRPDSFFKNAKSVTFQT 135


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 224 EDWLSARNYCRQR 262
           ED+LS   YCR R
Sbjct: 107 EDFLSVAVYCRDR 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,095
Number of Sequences: 438
Number of extensions: 3558
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)