Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C11
(461 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241... 43 2e-04
AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB... 43 2e-04
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA... 43 2e-04
BT024287-1|ABC86349.1| 968|Drosophila melanogaster IP13633p pro... 40 0.002
AE014134-1894|AAF52957.1| 950|Drosophila melanogaster CG5322-PA... 40 0.002
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 28 5.3
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 28 5.3
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 28 5.3
AE014297-4815|AAF57202.2| 603|Drosophila melanogaster CG11575-P... 28 5.3
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 28 5.3
BT024308-1|ABC86370.1| 416|Drosophila melanogaster IP11926p pro... 27 9.3
AE014297-3768|AAF56445.1| 416|Drosophila melanogaster CG11893-P... 27 9.3
>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
protein.
Length = 1080
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2
Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPN 421
F +Y G VG+N E NRSSGAYIFRPN
Sbjct: 635 FLFYEGAVGNNAEFLNRSSGAYIFRPN 661
>AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB,
isoform B protein.
Length = 1080
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2
Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPN 421
F +Y G VG+N E NRSSGAYIFRPN
Sbjct: 635 FLFYEGAVGNNAEFLNRSSGAYIFRPN 661
>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
isoform A protein.
Length = 1080
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2
Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPN 421
F +Y G VG+N E NRSSGAYIFRPN
Sbjct: 635 FLFYEGAVGNNAEFLNRSSGAYIFRPN 661
>BT024287-1|ABC86349.1| 968|Drosophila melanogaster IP13633p
protein.
Length = 968
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2
Query: 341 FGYYPGCVGDNREPANRSSGAYIFRP 418
FG Y G G+N E NRSSGAY+FRP
Sbjct: 596 FGIYKGYRGNNGESKNRSSGAYVFRP 621
>AE014134-1894|AAF52957.1| 950|Drosophila melanogaster CG5322-PA
protein.
Length = 950
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2
Query: 341 FGYYPGCVGDNREPANRSSGAYIFRP 418
FG Y G G+N E NRSSGAY+FRP
Sbjct: 578 FGIYKGYRGNNGESKNRSSGAYVFRP 603
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 71 KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 190
K I+D+G I+ N +N+K N+ +N++N + N
Sbjct: 2363 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 2402
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 71 KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 190
K I+D+G I+ N +N+K N+ +N++N + N
Sbjct: 602 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 641
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 71 KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 190
K I+D+G I+ N +N+K N+ +N++N + N
Sbjct: 2363 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 2402
>AE014297-4815|AAF57202.2| 603|Drosophila melanogaster CG11575-PA
protein.
Length = 603
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 331 EISA*IWLIREHSQVVFIHF-RKYVIVFRPF 242
E +A +WL HS++ ++ +K V++F PF
Sbjct: 125 EFAADVWLQHGHSRIYYVQLSKKSVLLFNPF 155
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 71 KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 190
K I+D+G I+ N +N+K N+ +N++N + N
Sbjct: 2363 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 2402
>BT024308-1|ABC86370.1| 416|Drosophila melanogaster IP11926p
protein.
Length = 416
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 251 KYDDIFSKMDE---DDLRMLSDEPDSSRDFSIGFGYYPGCVGD 370
+Y ++FSK+ + +++L+++PD +DF G P + D
Sbjct: 164 EYKNVFSKLAKWHAVSMKVLNEQPDILKDFKYGLMEMPSIMSD 206
>AE014297-3768|AAF56445.1| 416|Drosophila melanogaster CG11893-PA
protein.
Length = 416
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 251 KYDDIFSKMDE---DDLRMLSDEPDSSRDFSIGFGYYPGCVGD 370
+Y ++FSK+ + +++L+++PD +DF G P + D
Sbjct: 164 EYKNVFSKLAKWHAVSMKVLNEQPDILKDFKYGLMEMPSIMSD 206
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,893,691
Number of Sequences: 53049
Number of extensions: 325023
Number of successful extensions: 908
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -