Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C08
(207 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 30 0.036
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.084
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 0.78
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 1.0
SPCC330.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 1.0
SPMIT.01 |cox1||cytochrome c oxidase 1|Schizosaccharomyces pombe... 25 1.8
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 24 3.2
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 23 4.2
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 23 5.5
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 23 5.5
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 23 7.3
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 23 7.3
SPAP8A3.02c |||2 OG-Fe|Schizosaccharomyces pombe|chr 1|||Manual 23 7.3
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 23 7.3
SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 22 9.6
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 22 9.6
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 22 9.6
SPCC1322.07c |mug150||sequence orphan|Schizosaccharomyces pombe|... 22 9.6
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 22 9.6
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 22 9.6
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 22 9.6
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 22 9.6
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 30.3 bits (65), Expect = 0.036
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 103 EDTKDQQKTHTHNGKIHCKMKELTKTKPIWTRN 201
E K ++KT + + +EL KTKPIWTRN
Sbjct: 244 ESEKKEKKTKKVK-ETTTETEELNKTKPIWTRN 275
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.084
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 22 ATKLTKKKRQTAKMISQRSRMSVTMRREDTKDQQKTHTH-NGKIHCKMKELTKTK 183
+ K++ K ++++ + S T R++DT+ Q H H + K H + KE K K
Sbjct: 688 SAKMSYKDLDYVELMTGKKVYSRTERKKDTQKQSHDHGHSHSKSHDREKEKEKKK 742
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 0.78
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 182 LVLVNSFILQCIFPLCVCVFCWSFVSSLLIVTDILDLWLIIFAVCLFFFVSFVASCEFL 6
L L +L F L F +SF S L ++ I ++ F + F F F+ C FL
Sbjct: 110 LSLFRCLLLFFFFLLFFLSFSFSF-SFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFL 167
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 1.0
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 31 LTKKKRQTAKMISQRSRMSVTMRREDTKDQQKTHTHN 141
++ K ++ ++ + VT R+EDT+D + HN
Sbjct: 34 ISMKSPLEKEIANEYEALKVTERKEDTQDYNEPELHN 70
>SPCC330.19c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 90
Score = 25.4 bits (53), Expect = 1.0
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 113 FVSSLLIVTDILDLWLII--FAVCLFFFVSFVASCE 12
F L I+ +++ L L+ F C++F +F+A CE
Sbjct: 26 FGLQLNIIINLIPLVLLFAFFCPCIYFLHTFLADCE 61
>SPMIT.01 |cox1||cytochrome c oxidase 1|Schizosaccharomyces
pombe|chr mitochondrial|||Manual
Length = 537
Score = 24.6 bits (51), Expect = 1.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 119 WSFVSSLLIVTDILDLWLIIFAV 51
W+FVSS+ V IL L+L ++ +
Sbjct: 456 WNFVSSIGSVISILSLFLFMYVM 478
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 10 NSHEATKLTKKKRQTAKMISQRSRMSVTMRREDTKDQQKTHTH 138
N HE ++ K+KR+ + + R + RR+D K + T ++
Sbjct: 330 NFHEQSRALKEKRKKEQDENVRRKRENKKRRKDQKKEGITSSN 372
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 23.4 bits (48), Expect = 4.2
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 34 TKKKRQTAKMISQRS-RMSVTMRREDTKDQQKTHTHNGKIH---CKMKELTKTKPIWTRN 201
TKK R + I++ + + +V+ ED K T N C + T+T P+W R+
Sbjct: 591 TKKDRSVSFNINKNAEKPTVSNAAEDKKGDANTRRANATNPTPTCTNCQ-TRTTPLWRRS 649
Query: 202 AD 207
D
Sbjct: 650 PD 651
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 23.0 bits (47), Expect = 5.5
Identities = 13/67 (19%), Positives = 33/67 (49%)
Frame = +1
Query: 7 RNSHEATKLTKKKRQTAKMISQRSRMSVTMRREDTKDQQKTHTHNGKIHCKMKELTKTKP 186
+ EA + +++ +I +R + RED + + T ++ + +++E+TK K
Sbjct: 1399 KKDQEANNSSDTRKKYDSIIKKRDSL-----REDLEKFRSTGKNSSILEAQLREITKQKN 1453
Query: 187 IWTRNAD 207
+ ++ D
Sbjct: 1454 MLEQSLD 1460
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 23.0 bits (47), Expect = 5.5
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 145 KIHCKMKELTKTKP 186
+I C++KE+TKT P
Sbjct: 78 RILCRVKEITKTVP 91
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 22.6 bits (46), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 78 EDVGDDEEGGHKRPTEDTHA*RKNTLQDER 167
E D+E K ++++HA RK LQ ER
Sbjct: 92 EAENDEESSSQKSNSKESHAQRKK-LQKER 120
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 22.6 bits (46), Expect = 7.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 65 IIFAVCLFFFVSFVASCEFL 6
I AVCLFF S V SC +
Sbjct: 67 IYLAVCLFFLAS-VLSCAII 85
>SPAP8A3.02c |||2 OG-Fe|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 22.6 bits (46), Expect = 7.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 58 KMISQRSRMSVTMRR 102
K +S+ R+SVTMRR
Sbjct: 203 KWVSRSQRLSVTMRR 217
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 22.6 bits (46), Expect = 7.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 89 TDILDLWLIIFAVCLFFFVSF 27
T IL+ W ++F + + VSF
Sbjct: 231 TGILERWYVLFNITMLRLVSF 251
>SPBC609.04 |caf5||spermine family transmembrane transporter
Caf5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 22.2 bits (45), Expect = 9.6
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -2
Query: 179 VLVNSFILQCIFPLCVCVFCWSFVSSLLIVTDILDLWLIIFAVCLFF 39
VLV SF P+C+ F WS S+ + I+ L F
Sbjct: 398 VLVISFPATFFIPICLFWFGWSGRESVHWIVPIVSTLFYASGAFLMF 444
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 136 HNGKIHCKMKELTKTKPIWT 195
HNG + C+ + T+ +WT
Sbjct: 1199 HNGSMSCQSRRGVGTRFMWT 1218
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 65 IIFAVCLFFFVSFVAS 18
I+F +C+F F+ F +S
Sbjct: 407 ILFLLCIFVFLCFASS 422
>SPCC1322.07c |mug150||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 104
Score = 22.2 bits (45), Expect = 9.6
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -2
Query: 200 FLVQIGLVLVNSFILQCIFPLCVCVFCWSFVSSLLIVTDILDLWLIIFAVCLFFFVSF 27
+L+ ++ + L C FPL +F + ++ D LW + ++C F +SF
Sbjct: 43 YLLYKAWIVCTTISLCCDFPLFNFLFIAIPYFTEILYNDSSLLWFLFVSLC-FITLSF 99
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 22.2 bits (45), Expect = 9.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 182 LVLVNSFILQCIFPLCVCVFCWSFVS 105
+VL N++ IF + + C++FVS
Sbjct: 706 IVLGNNYFTTLIFSSLLILACYAFVS 731
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 85 SVTMRREDTKDQQKTHTHNGKIHCKMKELTKTKPI 189
SVT + K + T NGK++ K + PI
Sbjct: 227 SVTSSTHERKSKTYVITKNGKLYLKHNSVADDIPI 261
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 160 MKELTKTKPIWTRNA 204
+K L + +P+WTR A
Sbjct: 225 LKPLFEKRPVWTRRA 239
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 22.2 bits (45), Expect = 9.6
Identities = 6/24 (25%), Positives = 14/24 (58%)
Frame = +1
Query: 136 HNGKIHCKMKELTKTKPIWTRNAD 207
H ++C + + ++ +WT +AD
Sbjct: 221 HQSNVYCLLFDPQDSEALWTASAD 244
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.120 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,481
Number of Sequences: 5004
Number of extensions: 9374
Number of successful extensions: 46
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 2,362,478
effective HSP length: 48
effective length of database: 2,122,286
effective search space used: 42445720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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