Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C08
(207 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.094
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 1.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 1.2
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 1.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 1.5
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 1.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 2.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 19 4.7
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 19 6.2
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 19 8.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 8.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 8.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 8.2
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 25.0 bits (52), Expect = 0.094
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 67 SQRSRMSVT--MRREDTKDQQKTHTHNGKIHCKMKELTKTKP 186
S++S VT + RE+T+D + T T N K H + L T P
Sbjct: 39 SRQSSFEVTSLLMREETEDAEDTQTLNLK-HLRAAVLVLTNP 79
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 1.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 80 LDLWLIIFAVCLFFF 36
L+ WL I + CL++F
Sbjct: 305 LNEWLYILSGCLYYF 319
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 1.2
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LQCIFPLCVCVFCWSFVSSLLIV 90
+QC+ VC+ WSF+ S +++
Sbjct: 385 IQCL--TVVCLAFWSFIVSTILL 405
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 1.5
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -2
Query: 131 CVFCWSFVSSLLIV 90
C+F W++V L+ +
Sbjct: 223 CIFIWAYVIPLIFI 236
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 1.5
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Frame = +1
Query: 55 AKMISQRSRMSVTMRREDTKDQ-------QKTHTHNGKIHCKMKELTKTKP 186
+K S + +SV RR TK++ ++ H+GK+H M+ T +P
Sbjct: 126 SKSFSVKENLSVH-RRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERP 175
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 1.5
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -2
Query: 131 CVFCWSFVSSLLIV 90
C+F W++V L+ +
Sbjct: 223 CIFIWAYVIPLIFI 236
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 2.7
Identities = 11/53 (20%), Positives = 20/53 (37%)
Frame = +1
Query: 31 LTKKKRQTAKMISQRSRMSVTMRREDTKDQQKTHTHNGKIHCKMKELTKTKPI 189
+ K K+ M ++ + V K+Q T + K T T+P+
Sbjct: 752 VAKNKKNVGSMSRNKALLPVIKPANVNKEQSPNSTKETTPKKERKTATTTQPV 804
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 19.4 bits (38), Expect = 4.7
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = -1
Query: 102 PPHRHRH 82
PPH H H
Sbjct: 349 PPHHHHH 355
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 183 FSLGQLFHLAVY 148
+SLGQ+F L ++
Sbjct: 165 YSLGQVFMLCIF 176
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 18.6 bits (36), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 10 NSHEATKLTKKKRQTAKMISQRSR 81
NS+ + T K+R ++ +RSR
Sbjct: 287 NSYRKYRETSKERSRDRIERERSR 310
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 18.6 bits (36), Expect = 8.2
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = -1
Query: 99 PHRHRHP 79
PH H HP
Sbjct: 463 PHHHPHP 469
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 18.6 bits (36), Expect = 8.2
Identities = 5/19 (26%), Positives = 9/19 (47%)
Frame = -2
Query: 146 FPLCVCVFCWSFVSSLLIV 90
+P C CW+ + + V
Sbjct: 486 YPCCWWKICWTITTPAICV 504
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 18.6 bits (36), Expect = 8.2
Identities = 5/19 (26%), Positives = 9/19 (47%)
Frame = -2
Query: 146 FPLCVCVFCWSFVSSLLIV 90
+P C CW+ + + V
Sbjct: 539 YPCCWWKICWTITTPAICV 557
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.120 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,287
Number of Sequences: 438
Number of extensions: 811
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 2912559
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
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