Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_C01
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    27   0.31 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   0.95 
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   2.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   5.1  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   5.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   6.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   6.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   6.7  
AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-l...    22   6.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   8.9  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 162 RREWWWGATEAASCRHH 112
           RR +WW  TE A CR H
Sbjct: 269 RRAYWW-TTEIAQCRSH 284


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = -3

Query: 247 CLEYTSMLSPVNHQR 203
           C++ +S+LSP+NH+R
Sbjct: 744 CVDPSSLLSPLNHKR 758



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 275  FVPMIAPTALFGIYKYVV 222
            FVP +   A F +Y Y++
Sbjct: 1949 FVPRLPQQAAFALYNYII 1966


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 288 YMRTFCANDSTNSVVWNIQVCCL 220
           Y RT  ANDSTN ++ + +V  L
Sbjct: 839 YPRTLVANDSTNDLLSHNKVSSL 861


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 259 AIIGTKGSH-IRNIIRFSNASVKIAPLEQDK 348
           AI+ T G     N+I FS+ S  I P  QDK
Sbjct: 294 AILDTLGDDDFFNLISFSDQSRVIVPCFQDK 324


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 300 NYIPYMRTFCANDSTNSVVWNIQVCCLL 217
           +YI  ++ +   + TN  ++ +Q CC L
Sbjct: 389 SYIVRVKIYLETEHTNMNIYLVQNCCQL 416


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 116 CRQDAASVAPHHHSRRQS 169
           C   +A   PHHH   QS
Sbjct: 7   CSPQSAPSPPHHHHSSQS 24


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 116 CRQDAASVAPHHHSRRQS 169
           C   +A   PHHH   QS
Sbjct: 7   CSPQSAPSPPHHHHSSQS 24


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 64  VLAPQSIMFPGLHPMAMMSTGRGF 135
           +LA      PG+ P+  ++TGRG+
Sbjct: 532 LLASPVTGLPGVAPVPALATGRGW 555


>AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-like
           4 protein protein.
          Length = 161

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 APHHHSRRQSTLL*LVR 190
           AP H +RR   LL LVR
Sbjct: 58  APRHENRRLENLLDLVR 74


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 223 SPVNHQRLVVQSDQLKERRLAAGMVVGRHRSRVLST 116
           SP+NHQ     ++     R  + ++ G  R R++ T
Sbjct: 61  SPINHQGNAASANVAVADRQQSLILAGGRRQRIMWT 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.127    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,181
Number of Sequences: 2352
Number of extensions: 7935
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)