Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C01
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 71 2e-12
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 71 2e-12
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 70 3e-12
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 69 5e-12
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 69 5e-12
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 66 3e-11
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 66 3e-11
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 64 1e-10
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 64 1e-10
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 59 4e-09
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 44 2e-04
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 44 2e-04
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 44 2e-04
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 44 2e-04
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 40 0.004
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 40 0.004
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 40 0.004
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 37 0.019
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 37 0.019
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 37 0.019
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 37 0.019
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 37 0.019
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 37 0.019
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 36 0.034
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 34 0.14
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 34 0.14
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 34 0.14
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 34 0.14
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 34 0.14
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 34 0.14
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 34 0.14
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 34 0.14
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 34 0.14
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 34 0.14
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 33 0.31
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 33 0.31
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 33 0.31
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 33 0.31
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 33 0.31
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 33 0.31
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 33 0.31
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 33 0.31
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 33 0.31
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 33 0.31
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 32 0.55
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 1.7
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 31 1.7
AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein. 29 5.1
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 29 6.8
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 29 6.8
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 29 6.8
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 29 6.8
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 29 6.8
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 29 6.8
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 29 6.8
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 28 8.9
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 28 8.9
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 28 8.9
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 28 8.9
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 28 8.9
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 28 8.9
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 28 8.9
AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein. 28 8.9
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 28 8.9
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 28 8.9
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 70.5 bits (165), Expect = 2e-12
Identities = 39/111 (35%), Positives = 59/111 (53%)
Frame = +1
Query: 7 KAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXXG 186
+AE +I K+R++YEND+ ++ QS + PGL+ + + G
Sbjct: 199 RAEQEIMKKVREAYENDVAAMSLQSHLIPGLN---LAAVGLFPASSSAVPPPPSSVTGAA 255
Query: 187 QTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
+ QE ++IP AVGAIIG KG HI+ + RF++AS+KIAP E
Sbjct: 256 PYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 306
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 70.5 bits (165), Expect = 2e-12
Identities = 39/111 (35%), Positives = 59/111 (53%)
Frame = +1
Query: 7 KAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXXG 186
+AE +I K+R++YEND+ ++ QS + PGL+ + + G
Sbjct: 338 RAEQEIMKKVREAYENDVAAMSLQSHLIPGLN---LAAVGLFPASSSAVPPPPSSVTGAA 394
Query: 187 QTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
+ QE ++IP AVGAIIG KG HI+ + RF++AS+KIAP E
Sbjct: 395 PYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
L +P VGAIIG +G+ IRNI + + + + +
Sbjct: 200 LLVPTQYVGAIIGKEGATIRNITKQTQSKIDV 231
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 69.7 bits (163), Expect = 3e-12
Identities = 39/111 (35%), Positives = 59/111 (53%)
Frame = +1
Query: 7 KAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXXG 186
+AE +I K+R++YEND+ ++ QS + PGL+ + + G
Sbjct: 338 RAEQEIMKKVREAYENDVAAMSLQSHLTPGLN---LAAVGLFPASSSAVPPPPSSVTGAA 394
Query: 187 QTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
+ QE ++IP AVGAIIG KG HI+ + RF++AS+KIAP E
Sbjct: 395 PYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
L +P VGAIIG +G+ IRNI + + + + +
Sbjct: 200 LLVPTQYVGAIIGKEGATIRNITKQTQSKIDV 231
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 68.9 bits (161), Expect = 5e-12
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +1
Query: 4 AKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXX 183
AKAE +I K+R+SYEND+ + Q+ + PGL+ A+ G
Sbjct: 337 AKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNAL-----GLFPPTSGMPPPTSGPPS 391
Query: 184 GQTA--QQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
T Q ET +L+IP +VGAIIG +G HI+ + RF+ AS+KIAP E
Sbjct: 392 AMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
L +P VGAIIG +G+ IRNI + + + + +
Sbjct: 200 LLVPTQFVGAIIGKEGATIRNITKQTQSKIDV 231
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 244 NNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQ 342
NN VG +IG +G +++ I + ++ + I+PL++
Sbjct: 285 NNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 68.9 bits (161), Expect = 5e-12
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +1
Query: 4 AKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXX 183
AKAE +I K+R+SYEND+ + Q+ + PGL+ A+ G
Sbjct: 337 AKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNAL-----GLFPPTSGMPPPTSGPPS 391
Query: 184 GQTA--QQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
T Q ET +L+IP +VGAIIG +G HI+ + RF+ AS+KIAP E
Sbjct: 392 AMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
L +P VGAIIG +G+ IRNI + + + + +
Sbjct: 200 LLVPTQFVGAIIGKEGATIRNITKQTQSKIDV 231
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 244 NNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQ 342
NN VG +IG +G +++ I + ++ + I+PL++
Sbjct: 285 NNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 66.5 bits (155), Expect = 3e-11
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +1
Query: 4 AKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXX 183
AKAE +I K+R+SYEND+ + Q+ + PGL+ A+ G
Sbjct: 337 AKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNAL-----GLFPPTSGMPPPTSGPPS 391
Query: 184 GQTA--QQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
T Q ET + +IP +VGAIIG +G HI+ + RF+ AS+KIAP E
Sbjct: 392 AMTPPYPQFEQSETETVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
L +P VGAIIG +G+ IRNI + + + + +
Sbjct: 200 LLVPTQFVGAIIGKEGATIRNITKQTQSKIDV 231
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 244 NNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQ 342
NN VG +IG +G +++ I + ++ + I+PL++
Sbjct: 285 NNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 66.5 bits (155), Expect = 3e-11
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +1
Query: 4 AKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXX 183
AKAE +I K+R+SYEND+ + Q+ + PGL+ A+ G
Sbjct: 337 AKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNAL-----GLFPPTSGMPPPTSGPPS 391
Query: 184 GQTA--QQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
T Q ET + +IP +VGAIIG +G HI+ + RF+ AS+KIAP E
Sbjct: 392 AMTPPYPQFEQSETETVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
L +P VGAIIG +G+ IRNI + + + + +
Sbjct: 200 LLVPTQFVGAIIGKEGATIRNITKQTQSKIDV 231
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 244 NNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQ 342
NN VG +IG +G +++ I + ++ + I+PL++
Sbjct: 285 NNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 64.5 bits (150), Expect = 1e-10
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Frame = +1
Query: 4 AKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAM--MSTG----------RG----- 132
A AE +I KLR+++END+ + Q+ + PGL+ A+ STG RG
Sbjct: 334 ASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAA 393
Query: 133 ----FCGXXXXXXXXXXXXXXGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNII 300
F G + QE L+IP AVGAIIG KG+HI+ +
Sbjct: 394 PYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLA 453
Query: 301 RFSNASVKIAPLE 339
RF+ AS+KIAP E
Sbjct: 454 RFAGASIKIAPAE 466
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
+ +P VGAIIG +G I+NI + + + V I
Sbjct: 197 ILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 228
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 64.5 bits (150), Expect = 1e-10
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Frame = +1
Query: 4 AKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAM--MSTG----------RG----- 132
A AE +I KLR+++END+ + Q+ + PGL+ A+ STG RG
Sbjct: 334 ASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAA 393
Query: 133 ----FCGXXXXXXXXXXXXXXGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNII 300
F G + QE L+IP AVGAIIG KG+HI+ +
Sbjct: 394 PYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLA 453
Query: 301 RFSNASVKIAPLE 339
RF+ AS+KIAP E
Sbjct: 454 RFAGASIKIAPAE 466
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
+ +P VGAIIG +G I+NI + + + V I
Sbjct: 197 ILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 228
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 59.3 bits (137), Expect = 4e-09
Identities = 40/112 (35%), Positives = 54/112 (48%)
Frame = +1
Query: 4 AKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXXX 183
A AE +I KLR+++END+ + S F L+P
Sbjct: 335 ASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQF---------------------- 372
Query: 184 GQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLE 339
G + QE L+IP AVGAIIG KG+HI+ + RF+ AS+KIAP E
Sbjct: 373 GPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 424
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
+ +P VGAIIG +G I+NI + + + V I
Sbjct: 198 ILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 229
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 109 AMMSTGRGFCGXXXXXXXXXXXXXXGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHI 288
AMM G GF G G A A +Q T L IPNN +G IIG +G++I
Sbjct: 249 AMMHGGTGFAGIDSSSPEVK-----GYWASLDAS-TQTTHELTIPNNLIGCIIGRQGANI 302
Query: 289 RNIIRFSNASVKIA-PLE 339
I + S A +KIA P+E
Sbjct: 303 NEIRQMSGAQIKIANPVE 320
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 109 AMMSTGRGFCGXXXXXXXXXXXXXXGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHI 288
AMM G GF G G A A +Q T L IPNN +G IIG +G++I
Sbjct: 249 AMMHGGTGFAGIDSSSPEVK-----GYWASLDAS-TQTTHELTIPNNLIGCIIGRQGANI 302
Query: 289 RNIIRFSNASVKIA-PLE 339
I + S A +KIA P+E
Sbjct: 303 NEIRQMSGAQIKIANPVE 320
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 109 AMMSTGRGFCGXXXXXXXXXXXXXXGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHI 288
AMM G GF G G A A +Q T L IPNN +G IIG +G++I
Sbjct: 249 AMMHGGTGFAGIDSSSPEVK-----GYWASLDAS-TQTTHELTIPNNLIGCIIGRQGANI 302
Query: 289 RNIIRFSNASVKIA-PLE 339
I + S A +KIA P+E
Sbjct: 303 NEIRQMSGAQIKIANPVE 320
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 109 AMMSTGRGFCGXXXXXXXXXXXXXXGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHI 288
AMM G GF G G A A +Q T L IPNN +G IIG +G++I
Sbjct: 249 AMMHGGTGFAGIDSSSPEVK-----GYWASLDAS-TQTTHELTIPNNLIGCIIGRQGANI 302
Query: 289 RNIIRFSNASVKIA-PLE 339
I + S A +KIA P+E
Sbjct: 303 NEIRQMSGAQIKIANPVE 320
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 184 GQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
GQ++ A T L IPN+ +G IIG +G+ I I + S A +KIA
Sbjct: 224 GQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 272
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 184 GQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
GQ++ A T L IPN+ +G IIG +G+ I I + S A +KIA
Sbjct: 272 GQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 320
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 184 GQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
GQ++ A T L IPN+ +G IIG +G+ I I + S A +KIA
Sbjct: 250 GQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 298
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 SQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA-PLE 339
+Q T++ L IPN+ +G IIG +G+ I I + S A +KIA P+E
Sbjct: 285 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 328
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 SQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA-PLE 339
+Q T++ L IPN+ +G IIG +G+ I I + S A +KIA P+E
Sbjct: 255 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 298
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 SQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA-PLE 339
+Q T++ L IPN+ +G IIG +G+ I I + S A +KIA P+E
Sbjct: 286 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 329
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 SQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA-PLE 339
+Q T++ L IPN+ +G IIG +G+ I I + S A +KIA P+E
Sbjct: 282 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 325
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 SQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA-PLE 339
+Q T++ L IPN+ +G IIG +G+ I I + S A +KIA P+E
Sbjct: 293 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 336
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 SQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA-PLE 339
+Q T++ L IPN+ +G IIG +G+ I I + S A +KIA P+E
Sbjct: 251 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 294
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 36.3 bits (80), Expect = 0.034
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 205 AGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
A T L IPN+ +G IIG +G+ I I + S A +KIA
Sbjct: 269 ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 310
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 428
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 354 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 393
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 223 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI-APLE 339
TT + IP + G+IIG G I+ I S AS+KI PLE
Sbjct: 367 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 406
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 195 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 298
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 204 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 243
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 298
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 81 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 120
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 208 GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
G + +PN+ +G +IG +GS I I + S A +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 184 GQTAQQGAG-DSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDK 348
G T + G D Q + IP+ A G+IIG G I + + + A++K++ L + K
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSK 92
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 205 AGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPES 360
AG + + ++ VGA+IG GS I+NI +N +++I +QPES
Sbjct: 63 AGHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQII----QEQPES 110
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 205 AGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPES 360
AG + + ++ VGA+IG GS I+NI +N +++I +QPES
Sbjct: 63 AGHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQII----QEQPES 110
>AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein.
Length = 659
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T + +P VG ++G KG+ I+ I + ++ + + P +DK+P
Sbjct: 326 QTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYI-VTP-SRDKEP 369
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T + +P VG ++G KG+ I+ I + ++ + + P +DK+P
Sbjct: 160 QTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYI-VTP-SRDKEP 203
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 184 GQTAQQGAG-DSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
G T + G D Q + IP+ A G+IIG G I + + + A++K++
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 184 GQTAQQGAG-DSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
G T + G D Q + IP+ A G+IIG G I + + + A++K++
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T + +P VG ++G KG+ I+ I + ++ + + P +DK+P
Sbjct: 160 QTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYI-VTP-SRDKEP 203
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T + +P VG ++G KG+ I+ I + ++ + + P +DK+P
Sbjct: 160 QTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYI-VTP-SRDKEP 203
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T + +P VG ++G KG+ I+ I + ++ + + P +DK+P
Sbjct: 160 QTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYI-VTP-SRDKEP 203
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T + +P VG ++G KG+ I+ I + ++ + + P +DK+P
Sbjct: 92 QTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYI-VTP-SRDKEP 135
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 333
+P+ VG IIG G I I + S V+I+P
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISP 182
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 211 DSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
D + L +PN+ G IIG G+ ++ ++ S A V+++
Sbjct: 134 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS 173
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 190 TAQQGAGDS-QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
TA++ A +S +E + +P N VGAI+G G + + A ++I+
Sbjct: 402 TAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 449
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 333
+P+ VG IIG G I I + S V+I+P
Sbjct: 95 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISP 126
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 333
+P+ VG IIG G I I + S ++IAP
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 138
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 333
+P+ VG IIG G I I + S V+I+P
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISP 182
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 333
+P+ VG IIG G I I + S ++IAP
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 137
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 333
+P+ VG IIG G I I + S ++IAP
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 138
>AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein.
Length = 520
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T + +P VG ++G KG+ I+ I + +N + I P +D+ P
Sbjct: 223 QVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYI-ITP-SRDRDP 266
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 211 DSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
D + L +PN+ G IIG G+ ++ ++ S A V+++
Sbjct: 128 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS 167
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 190 TAQQGAGDS-QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
TA++ A +S +E + +P N VGAI+G G + + A ++I+
Sbjct: 396 TAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 443
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 211 DSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
D + L +PN+ G IIG G+ ++ ++ S A V+++
Sbjct: 100 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS 139
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 190 TAQQGAGDS-QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
TA++ A +S +E + +P N VGAI+G G + + A ++I+
Sbjct: 368 TAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,621,700
Number of Sequences: 237096
Number of extensions: 1053080
Number of successful extensions: 2081
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2078
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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