Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_C01
(384 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 59 1e-09
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.052
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 33 0.052
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 33 0.052
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 31 0.28
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 31 0.28
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 31 0.28
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 0.49
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 29 1.1
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 29 1.1
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 28 2.0
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 28 2.0
U23177-8|AAM22054.1| 409|Caenorhabditis elegans Hypothetical pr... 27 3.4
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 27 3.4
U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 27 4.5
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 27 4.5
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 27 4.5
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 27 4.5
U40424-6|AAA81462.1| 65|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 27 4.5
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 27 4.5
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 27 4.5
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 27 4.5
U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical pr... 27 6.0
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 58.8 bits (136), Expect = 1e-09
Identities = 41/128 (32%), Positives = 67/128 (52%)
Frame = +1
Query: 1 MAKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXX 180
+ +AE+ ISAKL++ YE+D Q+ A QS+ P + PM M
Sbjct: 346 VVQAEALISAKLKKCYESDSQLRA-QSMQCP-MPPMMMPPILPPGASSSAVSAPHFIPTP 403
Query: 181 XGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPES 360
G Q + +++P++ +GA+IG KG +I+ IIR + ASVKI E+ Q E+
Sbjct: 404 PGVLQIQPGTTNLRQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKIEAPEEKTQREA 463
Query: 361 QNNAQQER 384
+ A+++R
Sbjct: 464 E-EAEKKR 470
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 226 TYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQD 345
T + +P +G IIG G ++R + R + A VKI E++
Sbjct: 560 TEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEEERN 599
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 58.8 bits (136), Expect = 1e-09
Identities = 41/128 (32%), Positives = 67/128 (52%)
Frame = +1
Query: 1 MAKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGXXXXXXXXXXXXX 180
+ +AE+ ISAKL++ YE+D Q+ A QS+ P + PM M
Sbjct: 470 VVQAEALISAKLKKCYESDSQLRA-QSMQCP-MPPMMMPPILPPGASSSAVSAPHFIPTP 527
Query: 181 XGQTAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPES 360
G Q + +++P++ +GA+IG KG +I+ IIR + ASVKI E+ Q E+
Sbjct: 528 PGVLQIQPGTTNLRQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKIEAPEEKTQREA 587
Query: 361 QNNAQQER 384
+ A+++R
Sbjct: 588 E-EAEKKR 594
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 226 TYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQD 345
T + +P +G IIG G ++R + R + A VKI E++
Sbjct: 684 TEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEEERN 723
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.052
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPESQ 363
Q Y+++P G +IG G +I+ I R + A+ +AP + K + +
Sbjct: 284 QSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEK 332
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 33.5 bits (73), Expect = 0.052
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPESQ 363
Q Y+++P G +IG G +I+ I R + A+ +AP + K + +
Sbjct: 331 QSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEK 379
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 33.5 bits (73), Expect = 0.052
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA 330
+ IP+NAVGAIIG G +RN+ +N V+++
Sbjct: 46 ILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMS 78
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +1
Query: 232 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 333
+ +PN + G +IG G++I++I +++ P
Sbjct: 138 IVMPNTSAGMVIGKSGANIKDIREQFGCQIQVYP 171
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 202 GAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPE 357
G G + + +P ++VG IIG +G I+ + + ++ P + PE
Sbjct: 180 GGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPE 231
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPES 360
IP +AVG +IG GS I+ I + V+++P D P S
Sbjct: 13 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSP---DADPSS 50
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 202 GAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPE 357
G G + + +P ++VG IIG +G I+ + + ++ P + PE
Sbjct: 243 GGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPE 294
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPES 360
IP +AVG +IG GS I+ I + V+++P D P S
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSP---DADPSS 113
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 202 GAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPE 357
G G + + +P ++VG IIG +G I+ + + ++ P + PE
Sbjct: 221 GGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPE 272
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPES 360
IP +AVG +IG GS I+ I + V+++P D P S
Sbjct: 54 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSP---DADPSS 91
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 30.3 bits (65), Expect = 0.49
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 199 QGA-GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
QGA Q T+Y+ +P VG ++G KG+ I+ I + ++ + I P ++++P
Sbjct: 157 QGAHAPGQITSYVRVPLRVVGLVVGPKGATIKRIQQDTHTYI-ITP-SREREP 207
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T+Y+ +P VG ++G KG+ I+ I + ++ + I P ++++P
Sbjct: 136 QITSYVRVPLRVVGLVVGPKGATIKRIQQDTHTYI-ITP-SREREP 179
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQP 354
Q T+Y+ +P VG ++G KG+ I+ I + ++ + I P ++++P
Sbjct: 136 QITSYVRVPLRVVGLVVGPKGATIKRIQQDTHTYI-ITP-SREREP 179
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 202 GAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPE 357
G G T + IP++ G IIG G I I + S A + + + + QPE
Sbjct: 294 GGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLE--QSNGQPE 343
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 202 GAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKQPE 357
G G T + IP++ G IIG G I I + S A + + + + QPE
Sbjct: 311 GGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLE--QSNGQPE 360
>U23177-8|AAM22054.1| 409|Caenorhabditis elegans Hypothetical
protein C56G2.1b protein.
Length = 409
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
IPN+ VG IIG KG I+ + +N + I
Sbjct: 77 IPNSLVGLIIGVKGKTIKELSVRTNVRMLI 106
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 238 IPNNAVGAIIGTKGSHIRNIIRFSNASVKI 327
IPN+ VG IIG KG I+ + +N + I
Sbjct: 535 IPNSLVGLIIGVKGKTIKELSVRTNVRMLI 564
>U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical
protein ZK418.8 protein.
Length = 279
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 211 DSQETTYLYIPNNAVGAIIGTKGSHIRNII 300
D+ + ++ IP AVGA++G +G +R ++
Sbjct: 52 DASKDYFIRIPAFAVGAVVGKRGMTLRRLM 81
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 292 NIIRFSNASVKIAPLEQDKQPESQNNAQQER 384
+I R A + LEQ+KQ E Q N +ER
Sbjct: 311 HIERQRQAEARAKALEQEKQEEKQKNEDRER 341
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 941 FNREMWWVATEICTERHVQKRAKLIKKF 968
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 941 FNREMWWVATEICTERHVQKRAKLIKKF 968
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 941 FNREMWWVATEICTERHVQKRAKLIKKF 968
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 941 FNREMWWVATEICTERHVQKRAKLIKKF 968
>U40424-6|AAA81462.1| 65|Caenorhabditis elegans Hypothetical
protein C24A3.8 protein.
Length = 65
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 90 SRLAPYGDDVDRTRLLWRPTTIPAANLRSFSWSDCTTRRW 209
SR Y +D DRT ++ P T+ +++ + + RRW
Sbjct: 24 SRHDTYNNDCDRTLVIMAPRTLAYSSVFTVFTTTARARRW 63
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 818 FNREMWWVATEICTERHVQKRAKLIKKF 845
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 941 FNREMWWVATEICTERHVQKRAKLIKKF 968
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 941 FNREMWWVATEICTERHVQKRAKLIKKF 968
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 165 WRREWWWGATEAASCRHHRHRVQAGKHY 82
+ RE WW ATE + RH + R + K +
Sbjct: 941 FNREMWWVATEICTERHVQKRAKLIKKF 968
>U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical
protein K07E1.1 protein.
Length = 221
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 113 IAIGCKPGNIILCGANTCKSFS*L*RNFAEI 21
+ I C+ G++IL ANTC F+ NF ++
Sbjct: 181 VRIFCEYGDLILIPANTCFRFTTTPHNFVKM 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,648,478
Number of Sequences: 27780
Number of extensions: 165349
Number of successful extensions: 353
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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