Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_C01
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   6.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   6.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   6.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   6.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   8.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   8.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   8.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   8.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 331  PLEQDKQPESQNNAQQER 384
            P +Q  QP+ Q   QQ++
Sbjct: 1524 PQQQQPQPQQQQQQQQQQ 1541


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 362 WLSGCLSCSNGAILTEALLN 303
           W   CL+   GA+L  AL+N
Sbjct: 307 WTGVCLTFVFGALLEFALVN 326


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 362 WLSGCLSCSNGAILTEALLN 303
           W   CL+   GA+L  AL+N
Sbjct: 307 WTGVCLTFVFGALLEFALVN 326


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 13  ESQISAKLRQSYEN 54
           ESQ S  LRQ Y+N
Sbjct: 79  ESQGSVTLRQEYKN 92


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 217 QETTYLYIPNNAVGAIIGTKGSHIRNII 300
           +  T+L  P +A    +  +G+HI +I+
Sbjct: 193 ERVTFLDTPGHAAFISMRHRGAHITDIV 220


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 134 KPRPVDIIAIGCKPGNIILCGANTC 60
           K  P+   ++ C+PG I     +TC
Sbjct: 442 KDIPISACSLPCEPGMIKKQQGDTC 466


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 20  KSQQNCVKAMK 52
           KSQ +C+KA+K
Sbjct: 421 KSQDDCLKAIK 431


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 20  KSQQNCVKAMK 52
           KSQ +C+KA+K
Sbjct: 421 KSQDDCLKAIK 431


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 20  KSQQNCVKAMK 52
           KSQ +C+KA+K
Sbjct: 421 KSQDDCLKAIK 431


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 135 LWRPTTIPAANLRSFSWSDCTTRRW*FTGDNIL 233
           L+RP +  A +LR    S C    W F  D  L
Sbjct: 273 LFRPLSSEATDLRMGVASFCKAFPWHFVVDRQL 305


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 134 KPRPVDIIAIGCKPGNIILCGANTC 60
           K  P+   ++ C+PG I     +TC
Sbjct: 532 KDIPISACSLPCEPGMIKKQQGDTC 556


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.127    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,840
Number of Sequences: 438
Number of extensions: 2113
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)