Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_B20
         (474 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.3  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   2.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   6.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.9  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 18  GIRHEGAHLHLVYPYSGN 71
           GI     H HLVYP+ G+
Sbjct: 204 GINLHHWHWHLVYPFEGD 221


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 139 RRNTDRFPRAATKNGVSPHSDIVFPLY 59
           RR   R PR  + + +   S IVFPL+
Sbjct: 408 RRRRRRTPRYNSVSKIDRASRIVFPLF 434


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 235 EECASYTSTRLAVEQGGGSAPTVGTASS 152
           +  A+ TST  +   GG S+P+  + SS
Sbjct: 71  DSAAAITSTSPSYPGGGSSSPSPSSPSS 98


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 336 AARESGVARLAWMEVWRSA 392
           + R S  + L W E+WR +
Sbjct: 20  SVRCSAASGLRWFEIWRDS 38


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 61  YG*TRCRCAP 32
           YG T CRC P
Sbjct: 291 YGFTECRCDP 300


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 126 SVFLRVWGEELAVPTVGADP 185
           SV L++W EE     +  DP
Sbjct: 23  SVMLKIWTEEFLSTILRLDP 42


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 301 RTSSASTCTARPSPGQITRT 242
           R +   TC   PS   ITRT
Sbjct: 324 RNAFKETCRCSPSNPSITRT 343


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 222 DAHSSRLVRVICPGEGRAVHVLAEEVRGGRSA 317
           D H+  L++ +   + +  +VLA +V  G+ A
Sbjct: 45  DVHTGILIKALLTVQAKDSNVLAAKVWNGQYA 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,361
Number of Sequences: 438
Number of extensions: 3200
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)