Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B18
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 29 1.7
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 29 1.7
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 29 1.7
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 29 1.7
Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 27 6.9
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 625 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 663
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 170 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 208
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 808 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 846
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 413 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 451
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 754 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 792
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 413 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 451
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 808 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 846
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 223 LKNNFSAQHFDSLSTLDVNDKMATHD*FRFWLHGDLSCA 107
LKN +A+HF + T + D++ D W+H +L CA
Sbjct: 755 LKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCA 793
>Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical
protein W02A2.5 protein.
Length = 487
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 34 LFYYRTLNLVIHVAVLIVNSITCSVRKISLRAAKIGTNRVSPFCR*RQVLKV 189
LFY + N+V+ V L+ + I V K L A I +N +PF +++K+
Sbjct: 197 LFYTLSGNIVLFVFALLQSGILIEVYKGMLLTALITSNGDNPFANADEMIKL 248
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 313 QFINSPIFLNFFFKYS--IEVLFIPY*YNVMHYFVLVISERTVTQIKRYCNVAAASSSKI 486
+F NSPIFL + +E+ + H V+ +S R T I+R C +
Sbjct: 248 EFPNSPIFLMKCMDGARHVEIQIL----GDKHGDVIALSSRDCT-IQRRCQKVIEEAPAS 302
Query: 487 VIPGKIRNRKKKIA 528
++PG++ + KK A
Sbjct: 303 IVPGEVMQKMKKDA 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,985,102
Number of Sequences: 27780
Number of extensions: 212785
Number of successful extensions: 552
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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