Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B15
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 32 0.28
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 31 0.37
Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z81038-1|CAB02762.1| 219|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 29 2.0
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 29 2.6
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 29 2.6
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 28 3.4
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 28 3.4
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL132862-17|CAB60551.1| 266|Caenorhabditis elegans Hypothetical... 27 8.0
AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/68 (20%), Positives = 34/68 (50%)
Frame = +2
Query: 281 SQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVMRQVITRQPVLVSNSKIGDKELLVNQQT 460
+Q N VS ++T+++ + ++ Q+P+ + + +V+ K+ +E Q +
Sbjct: 583 AQLNERANAVSNIRTQMEEKIADSSNSKQRPISQPITEIPEGIVAQKKVSREEAEAVQHS 642
Query: 461 PGVIEKPS 484
+ +KPS
Sbjct: 643 NALFKKPS 650
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.9 bits (69), Expect = 0.28
Identities = 25/84 (29%), Positives = 34/84 (40%)
Frame = +2
Query: 257 PSRSQVVGSQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVMRQVITRQPVLVSNSKIGDK 436
PS+S +GS Q +T +ST E + + TQ P QP VS+S
Sbjct: 901 PSQSTTIGSTQGSTSPGISTTSEE-----MTSQGSTQTPGSTGSTVTQPSTVSDSTSSGS 955
Query: 437 ELLVNQQTPGVIEKPSTSKPVKPS 508
+ V PSTS+ PS
Sbjct: 956 TVTVGSTEGSSSPIPSTSQNTNPS 979
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.37
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Frame = +2
Query: 203 QPIIMSAPMKTNVHRVVQPSRSQVVGSQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVMR 382
+P++ AP + V Q +Q QQA V + V+Q QQPV++
Sbjct: 140 KPVVQQAPAQQAPKSVAQAPPAQAKPIVQQAQAQPVVQKAPTQQPPVVQQTPPPQQPVVQ 199
Query: 383 QVITR-----QPVLVSNSKIGDKELLVNQQTPGVIEKPSTSKPV 499
+ + QP + + V Q +P + +P +PV
Sbjct: 200 APVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPV 243
>Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.3 protein.
Length = 394
Score = 30.7 bits (66), Expect = 0.65
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 266 SQVVGSQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVMRQVITRQPVLVSNSKIGDKELL 445
SQ Q+ TV+Q +TV E S +TNV V ++ Q VS +E
Sbjct: 161 SQESTVSQETTVSQDTTVSQETSVSH-ETNVSPDTTVSQESTVSQDTTVSQETTLSQETT 219
Query: 446 VNQQT 460
V+Q+T
Sbjct: 220 VSQET 224
>Z81038-1|CAB02762.1| 219|Caenorhabditis elegans Hypothetical
protein C25A1.1 protein.
Length = 219
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/104 (18%), Positives = 42/104 (40%)
Frame = +2
Query: 200 NQPIIMSAPMKTNVHRVVQPSRSQVVGSQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVM 379
NQP +K + +V+ P +S+ A + ++ + + + V+ + V +PV+
Sbjct: 114 NQPSSSRFILKPSTSKVLGPPKSKQAAFLSTAIKRKSTSTEEKKQEDVVSSKVSKPEPVI 173
Query: 380 RQVITRQPVLVSNSKIGDKELLVNQQTPGVIEKPSTSKPVKPSG 511
+Q+ Q + + + + P + TSK G
Sbjct: 174 KQIGALQALCEYDPSSDSESDASSDDEPETLSLLQTSKSAAQGG 217
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +2
Query: 320 QTEVKTSVIQTNVKTQQPVMRQVITRQPVLVSNSKIGDKELLVNQQTPGVIEKPSTSKPV 499
+TE + VI + + + + ++ +V N K+ + + + TP +KPS+S PV
Sbjct: 544 ETEEEIVVISSPEAPENGKLATIFSKSTPVVGNKKMLELKKAETKSTPPTSQKPSSSGPV 603
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 194 SNNQPIIMSAPMKTNVHRVVQPSRSQVVGSQQQATVNQVSTVQTEVKTSVIQT-NVKTQQ 370
+ +P + A K ++QP ++ S + +T+ TE++T ++T ++KT
Sbjct: 330 TTTEPSPLQASSKPATEPLLQPESARTASSSASSKPEVQTTIPTEIQTPSLRTSSLKTST 389
Query: 371 PVMRQVIT 394
V +T
Sbjct: 390 TVTTTTVT 397
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = +2
Query: 230 KTNVHRVVQPSRSQVVGSQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVMRQVITRQ 400
K H QP T +++T E T+ I T T++P+ V T +
Sbjct: 331 KQRCHTTTQPPSPTTESLPTSTTTYEMNTTSLETSTTDISTITSTEEPISTTVKTHE 387
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 332 KTSVIQTNVKTQQPVMRQVITRQPVLVSNSKIGDKELLVNQQTPGVIEKPSTSKPVK 502
K+ ++ V +QP + + PV N ++G+ L+ N + P +KP PVK
Sbjct: 58 KSKKSKSKVTKKQPKKKVIKPLAPV--PNEQLGEVVLVKNVKLPETPQKPENDTPVK 112
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/78 (20%), Positives = 37/78 (47%)
Frame = +2
Query: 272 VVGSQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVMRQVITRQPVLVSNSKIGDKELLVN 451
++G+++ A +N+V V T + S + ++ P+ + + P++ S E+
Sbjct: 642 IIGAKKLAALNEVKNVHTVPEPSAPAEPIVSEAPLQVKTSSSDPIVTST------EVPSV 695
Query: 452 QQTPGVIEKPSTSKPVKP 505
+ P I+ +KP+ P
Sbjct: 696 AEPPAPIQNVEEAKPIVP 713
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 263 RSQVVGSQQQATVNQVSTVQTEVKTSVIQTNVKTQQPVMRQVITRQPVLVSN 418
RS + V + T + + K ++TN+K +PV +V R P N
Sbjct: 56 RSLTSAQRISTKVQEEVTEEVKPKRKYVKTNIKEPKPVPERVYVRGPYKKKN 107
>AL132862-17|CAB60551.1| 266|Caenorhabditis elegans Hypothetical
protein Y73F8A.23 protein.
Length = 266
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 216 IIIGWLFDTAIICWFPCNSCWLPCII*LLDE 124
+++ W + + W PC+ W C+ LDE
Sbjct: 29 MVVIWGAPSGVDVWEPCSETWKQCLQKCLDE 59
>AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical
protein Y27F2A.6 protein.
Length = 487
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 155 GYPVLSDYWTKCLSKPAVVSELLR 84
GYP +++W + KP +++ELLR
Sbjct: 179 GYPDYTNHWMEYRFKPLLLAELLR 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,127,623
Number of Sequences: 27780
Number of extensions: 207694
Number of successful extensions: 667
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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