Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_B15
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    23   1.4  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   1.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.7  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -1

Query: 501 FTGFDVDGFSITPGVC*LTR---SSLSPILELLTNTG 400
           ++  + D F    GV  +TR   SS+SP++EL  N G
Sbjct: 12  YSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNG 48


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 404 VLVSNSKIGDKELLVNQQTPGVIEKPSTSK 493
           ++ S+    D+E   N Q P +   P+TS+
Sbjct: 73  IISSDHDDSDEEYAANSQPPRITSVPNTSR 102


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 433 ITNLRVADQHRLTGDDLPHHRLLGFHIGLYNA 338
           I  +R++    L G DL  HR+    IG+  A
Sbjct: 411 IIPIRMSIHDELLGADLVEHRIRHSQIGISRA 442


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 222 ALIIIGWLFDTAIICWFP 169
           A I +G +    +ICW P
Sbjct: 270 AAITVGVIMGVFLICWVP 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,856
Number of Sequences: 438
Number of extensions: 2339
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)