Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_B14
         (537 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117265-1|AAI17266.1| 1323|Homo sapiens chromosome 11 open read...    30   6.0  
AY040367-1|AAK91776.1|  215|Homo sapiens interleukin 19 protein.       30   6.0  
AL513315-2|CAH71814.1|  215|Homo sapiens interleukin 19 protein.       30   6.0  
AK023651-1|BAB14627.1|  422|Homo sapiens protein ( Homo sapiens ...    30   6.0  
AJ430203-1|CAD22881.1| 1322|Homo sapiens EMSY protein protein.         30   6.0  
AY070433-1|AAL65260.1|  255|Homo sapiens hypothetical protein GL...    29   7.9  

>BC117265-1|AAI17266.1| 1323|Homo sapiens chromosome 11 open reading
            frame 30 protein.
          Length = 1323

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +2

Query: 200  QHVPLISQAPSSVRTHNSPQYHSN--SLPASQESQVAQ--ERKFAEKPNALKKVALDDLD 367
            Q +P + QAP+  + +  PQ   +  SLPAS E Q A   E+    + +++ K+  +   
Sbjct: 1054 QQLPKLQQAPNQPKIYVQPQTPQSQMSLPASSEKQTASQVEQPIITQGSSVTKITFEGRQ 1113

Query: 368  EIQTNSISDG 397
                  I+ G
Sbjct: 1114 PPTVTKITGG 1123


>AY040367-1|AAK91776.1|  215|Homo sapiens interleukin 19 protein.
          Length = 215

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 531 SILSLPMERVKLILYQCLSLLFGPVVAGLKIICI 430
           S  SLP+  V   ++ C+ +L+G V  G+K+ C+
Sbjct: 11  SACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCV 44


>AL513315-2|CAH71814.1|  215|Homo sapiens interleukin 19 protein.
          Length = 215

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 531 SILSLPMERVKLILYQCLSLLFGPVVAGLKIICI 430
           S  SLP+  V   ++ C+ +L+G V  G+K+ C+
Sbjct: 11  SACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCV 44


>AK023651-1|BAB14627.1|  422|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13589 fis, clone PLACE1009308, weakly similar to
           GLUCOSE REPRESSION MEDIATOR PROTEIN. ).
          Length = 422

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +2

Query: 200 QHVPLISQAPSSVRTHNSPQYHSN--SLPASQESQVAQ--ERKFAEKPNALKKVALDDLD 367
           Q +P + QAP+  + +  PQ   +  SLPAS E Q A   E+    + +++ K+  +   
Sbjct: 153 QQLPKLQQAPNQPKIYVQPQTPQSQMSLPASSEKQTASQVEQPIITQGSSVTKITFEGRQ 212

Query: 368 EIQTNSISDG 397
                 I+ G
Sbjct: 213 PPTVTKITGG 222


>AJ430203-1|CAD22881.1| 1322|Homo sapiens EMSY protein protein.
          Length = 1322

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +2

Query: 200  QHVPLISQAPSSVRTHNSPQYHSN--SLPASQESQVAQ--ERKFAEKPNALKKVALDDLD 367
            Q +P + QAP+  + +  PQ   +  SLPAS E Q A   E+    + +++ K+  +   
Sbjct: 1053 QQLPKLQQAPNQPKIYVQPQTPQSQMSLPASSEKQTASQVEQPIITQGSSVTKITFEGRQ 1112

Query: 368  EIQTNSISDG 397
                  I+ G
Sbjct: 1113 PPTVTKITGG 1122


>AY070433-1|AAL65260.1|  255|Homo sapiens hypothetical protein GL002
           protein.
          Length = 255

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 200 QHVPLISQAPSSVRTHNSPQYHSN--SLPASQESQVAQE 310
           Q +P + QAP+  + +  PQ   +  SLPAS E Q A +
Sbjct: 153 QQLPKLQQAPNQPKIYVQPQTPQSQMSLPASSEKQTASQ 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,722,000
Number of Sequences: 237096
Number of extensions: 1744657
Number of successful extensions: 5881
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5881
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)