Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_B14
         (537 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   1.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.0  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 168 VRQFSTRLHIPNMFHLYHRHPAVSERITVRNITATPCQRHRK 293
           VR+ S R +   ++HL + H   +    +   +   C+RH+K
Sbjct: 261 VRRDSRRKNYGGVYHLDNHHVHHANHHAILGHSGFLCERHQK 302


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 202 LGICKRVENCRTADKDNEHPTCCLVTHP 119
           LG+ +  E     D   EHPTC L   P
Sbjct: 163 LGLHRANEPVVLDDSKEEHPTCALDLTP 190


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +1

Query: 130  QGSRLGVRCPYQQFDSSPHVCISPTCSTYITGTQQCQNA*QSAISQQLLASVTGKP 297
            Q +R G +    Q+        S   S  I  TQQ Q + Q+   + + A + GKP
Sbjct: 1149 QLNRQGKQVIQTQYQVVSQAQTSSGQSKIIASTQQQQQSQQAQTVRMVTAQLAGKP 1204


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 450 GLKIICIIIPSIFDHEKP 397
           GLK+I   +P+   HE P
Sbjct: 113 GLKVILDFVPNHSSHEHP 130


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 403 LVVKYARYDNANDFQPCHYG 462
           L V   +Y   + F P HYG
Sbjct: 914 LTVAVVQYKTQDGFGPIHYG 933


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,876
Number of Sequences: 438
Number of extensions: 3348
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)