Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B11
(622 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 220 1e-57
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 220 1e-57
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 220 1e-57
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 210 1e-54
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 149 3e-36
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 82 7e-16
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 220 bits (537), Expect = 1e-57
Identities = 102/125 (81%), Positives = 111/125 (88%)
Frame = +3
Query: 72 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 251
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 252 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 431
ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 432 FCIGF 446
FCIGF
Sbjct: 141 FCIGF 145
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +1
Query: 442 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 576
GFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 220 bits (537), Expect = 1e-57
Identities = 102/125 (81%), Positives = 111/125 (88%)
Frame = +3
Query: 72 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 251
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 252 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 431
ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 432 FCIGF 446
FCIGF
Sbjct: 141 FCIGF 145
Score = 81.8 bits (193), Expect = 7e-16
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 442 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKA 621
GFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 203
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 220 bits (537), Expect = 1e-57
Identities = 102/125 (81%), Positives = 111/125 (88%)
Frame = +3
Query: 72 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 251
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 252 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 431
ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 432 FCIGF 446
FCIGF
Sbjct: 141 FCIGF 145
Score = 81.8 bits (193), Expect = 7e-16
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 442 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKA 621
GFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 203
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 210 bits (513), Expect = 1e-54
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Frame = +3
Query: 72 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADSD 248
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 249 AERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 428
E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LR
Sbjct: 81 PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 140
Query: 429 VFCIGF 446
VFCIGF
Sbjct: 141 VFCIGF 146
Score = 75.8 bits (178), Expect = 4e-14
Identities = 37/61 (60%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +1
Query: 442 GFTNKDTLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 618
GFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 204
Query: 619 A 621
+
Sbjct: 205 S 205
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 149 bits (361), Expect = 3e-36
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +3
Query: 201 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 380
GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 381 IEANIDVKTTDGYVLRVFCIGF 446
IEA ++ KT DGY+LRVFCIGF
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGF 95
Score = 81.8 bits (193), Expect = 7e-16
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 442 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKA 621
GFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+
Sbjct: 94 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 153
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 81.8 bits (193), Expect = 7e-16
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 442 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKA 621
GFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+
Sbjct: 39 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 98
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 327 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 446
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGF
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGF 40
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,147,368
Number of Sequences: 53049
Number of extensions: 629538
Number of successful extensions: 1596
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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