Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B08
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 6.9
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 9.1
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 9.1
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 9.1
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF068710-2|AAC17770.1| 476|Caenorhabditis elegans Hypothetical ... 27 9.1
AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical ... 27 9.1
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 ARGSCNMNPVKIIFFLTF-VKSIFCDGSLLVPCDMTDLDCLGQSTKVFLEKTSKGIKQYN 177
++ S N ++ IFF++ + + CDG L++P + D G TK K ++N
Sbjct: 73 SKDSENKARIEHIFFISSNIALVLCDGQLIIPIHIKD----GVITK-------KEELRFN 121
Query: 178 IRPIDPWFISSLDVLADEDMRLLFHFNN 261
W I+ + L+D+ L+F NN
Sbjct: 122 ENHKSKWDITHVQKLSDDTFALVFSMNN 149
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 355 NIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDSTGVL 489
NI N+ +L T A A + G Y Y +D TG++
Sbjct: 1788 NIAKNLANQLASTLDTLENTLAARAIATGNLPYDYSNSVDGTGMV 1832
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 355 NIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDSTGVL 489
NI N+ +L T A A + G Y Y +D TG++
Sbjct: 1788 NIAKNLANQLASTLDTLENTLAARAIATGNLPYDYSNSVDGTGMV 1832
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1480 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1537
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1538 ELVVMEKEVPMEQVIAQEVH 1557
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1771 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1828
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1829 ELVVMEKEVPMEQVIAQEVH 1848
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1786 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1843
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1844 ELVVMEKEVPMEQVIAQEVH 1863
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1590 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1647
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1648 ELVVMEKEVPMEQVIAQEVH 1667
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1480 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1537
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1538 ELVVMEKEVPMEQVIAQEVH 1557
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1771 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1828
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1829 ELVVMEKEVPMEQVIAQEVH 1848
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1786 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1843
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1844 ELVVMEKEVPMEQVIAQEVH 1863
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 DFRIDTKTKSVVLKTKADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDS 477
DF I T K V K NI + G LFS + +AHA+ + K D++ DS
Sbjct: 1590 DFGISTNEKEV--SGKDPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDS 1647
Query: 478 -TGVLHFEVGPEIINCENIN 534
V+ EV E + + ++
Sbjct: 1648 ELVVMEKEVPMEQVIAQEVH 1667
>AF068710-2|AAC17770.1| 476|Caenorhabditis elegans Hypothetical
protein T06A1.5 protein.
Length = 476
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 200 NQGSMGR-ILYCLMPLLVFSRNTFVD 126
N S+G +L+C++ + +FSRN+F D
Sbjct: 4 NNASLGVFVLFCILFVYIFSRNSFDD 29
>AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical
protein R08F11.7 protein.
Length = 773
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 346 ADLNIVGNIVIELGEKSKLFSGTYTAHATSVGAAKYGYDLQMDSTGVL 489
AD IV + + K F+G AT + KYG D+ D+ VL
Sbjct: 52 ADGAIVSSQIANAESKQLQFTGDVLEIATQILVKKYGVDILEDANEVL 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,285,184
Number of Sequences: 27780
Number of extensions: 277723
Number of successful extensions: 760
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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