Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_B08
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    33   0.002
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.69 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.69 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.8  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   8.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   8.4  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 33.1 bits (72), Expect = 0.002
 Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = +1

Query: 115 CLGQSTKVFLEKTSKGIKQYNIRPIDPWFISSLDVLADE-DMRLLFHFNNVSVTGL-KNQ 288
           C+ ++ +  +   + G+K + I PI+P  + S+ +   +  + L   + N+ + GL KN 
Sbjct: 43  CIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNL 102

Query: 289 KIFDFRID 312
           +I ++ ID
Sbjct: 103 EIKNYNID 110


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 307 IDTKTKSVVLKTKADLNIVGNIV 375
           +D+    V L TK  LN++GNIV
Sbjct: 343 VDSYGNHVKLYTKQGLNVLGNIV 365


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 307 IDTKTKSVVLKTKADLNIVGNIV 375
           +D+    V L TK  LN++GNIV
Sbjct: 343 VDSYGNHVKLYTKQGLNVLGNIV 365


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor
          protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 19 MNPVKIIFFLTFVKSIFCD 75
          M PV+ IFFL+ V  +  D
Sbjct: 1  MFPVRSIFFLSLVSVVLLD 19


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 306 TKIKDFLVLQSGHGHIIKVKQQT 238
           ++I  FL+ +SG+ HI   K  T
Sbjct: 63  SEILSFLIEESGYFHIQATKPDT 85


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 297 KDFLVLQSGHGHIIKVKQQTHILVSQDV*G 208
           + F + Q     I++ +QQ HI+  + + G
Sbjct: 392 RSFALKQMKKAQIVETRQQQHIMSEKRIMG 421


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,713
Number of Sequences: 438
Number of extensions: 3778
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)