Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B06
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83238-11|CAE11318.1| 326|Caenorhabditis elegans Hypothetical p... 28 2.9
Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical pr... 28 3.9
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 27 5.1
AC006810-8|AAK84621.1| 364|Caenorhabditis elegans Hypothetical ... 27 5.1
Z83128-5|CAE17947.1| 72|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81454-8|CAD60404.1| 330|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z79753-1|CAB02086.1| 249|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z93381-3|CAB07606.1| 362|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z79605-5|CAB01907.2| 316|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z83238-11|CAE11318.1| 326|Caenorhabditis elegans Hypothetical
protein T08G3.12 protein.
Length = 326
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 256 GIFTFIRTKVLYFFFTTCKDPSKSTSMQKIT 164
GI TF +VLYFF+ T K KS + + T
Sbjct: 202 GILTFTTVQVLYFFYHTVKYLFKSKIISEST 232
>Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical
protein F32D8.2 protein.
Length = 568
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 243 SFVQKSFTFFSQHVKTHQNLRQCKKSLYKLTHE 145
+F+Q T F+Q VKTH+ +R + YK+ +E
Sbjct: 472 NFLQTLRTRFTQEVKTHKCVRSFELEDYKIFYE 504
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -1
Query: 298 KENYRT*LRSSPFTGIFTF-----IRTKVLYFFFTTCKDPSKS 185
K N T L ++P TGI IR V FF TC DP KS
Sbjct: 340 KTNADTHLIAAPTTGIILSGQSMGIRVGVTDNFFKTCADPGKS 382
>AC006810-8|AAK84621.1| 364|Caenorhabditis elegans Hypothetical
protein Y5H2B.1 protein.
Length = 364
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 299 LNYDPCFCPKNYDNKKSLTNIRFYKIRPLFMDVFRII 409
LN P F +N +KK L N+R K P M+ FRI+
Sbjct: 93 LNRTPLFFIENGYHKKMLDNLR--KTMPRLMEKFRIL 127
>Z83128-5|CAE17947.1| 72|Caenorhabditis elegans Hypothetical
protein W01D2.6 protein.
Length = 72
Score = 27.1 bits (57), Expect = 6.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 427 HILPIINNPEYVH 389
H++P+INNP Y H
Sbjct: 42 HLMPVINNPTYPH 54
>Z81454-8|CAD60404.1| 330|Caenorhabditis elegans Hypothetical
protein B0391.12 protein.
Length = 330
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 341 KKSLTNIRFYKIRPLFMDVFRIIYDG*NMTTHPLTCTRNNLFNI 472
KKS + YKI +++ VF I+Y ++ T P +++++F I
Sbjct: 28 KKSPKKLGNYKILMIYIAVFEILYSLLDLLTTPECFSKDSVFLI 71
>Z79753-1|CAB02086.1| 249|Caenorhabditis elegans Hypothetical
protein F20G2.1 protein.
Length = 249
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 244 FIRTKVLYFFFTTCKDPSKSTSMQKI 167
FI+ K + TC+DPS +T + I
Sbjct: 23 FIKNKDVQIIIGTCRDPSNATELNSI 48
>Z93381-3|CAB07606.1| 362|Caenorhabditis elegans Hypothetical
protein F28G4.3 protein.
Length = 362
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 281 IVTLVAIHWYFHIHSYKSPLLFFHNM*RPIKIYVNAKNHC 162
I T++ I Y + S SP H+ P++ + N KN+C
Sbjct: 16 ICTVILIAEYSRVRSPTSP----HSQRSPVRFFKNGKNNC 51
>Z79605-5|CAB01907.2| 316|Caenorhabditis elegans Hypothetical
protein ZK678.6 protein.
Length = 316
Score = 26.6 bits (56), Expect = 9.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 260 HWYFHIHSYKSPLLFFHNM 204
+W+FH+H + S LL H +
Sbjct: 106 YWFFHMHFWTSALLTVHRL 124
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 209 CEKKVKDFCTNECENTSEWRRA*LCPIIFFLNYDPCFCPKNYDNK 343
CEK + D ++CEN + C + +N C CP Y+ K
Sbjct: 944 CEKNIDDCVNSKCENGGK------C--VDLINSYRCDCPMEYEGK 980
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 209 CEKKVKDFCTNECENTSEWRRA*LCPIIFFLNYDPCFCPKNYDNK 343
CEK + D ++CEN + C + +N C CP Y+ K
Sbjct: 944 CEKNIDDCVNSKCENGGK------C--VDLINSYRCDCPMEYEGK 980
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,914,695
Number of Sequences: 27780
Number of extensions: 226627
Number of successful extensions: 529
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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