Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_B05
         (476 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    36   3e-04
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   9.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   9.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.0  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 35.5 bits (78), Expect = 3e-04
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = -2

Query: 472 WEILPQPPYSPDVL-TLRLIYTYFAEWHTAWLTSTSARMKK*KIG-STRKIKNFFAAGFA 299
           W++LP PPYSPD+  +   ++            +    +K   I     K + F+  G  
Sbjct: 264 WDVLPHPPYSPDLAPSDYFLFRSLQNSLNGKNFNNDDDIKSYLIQFFANKNQKFYERGIM 323

Query: 298 CMPETWAKVVANDGHY 251
            +PE W KV+  +G +
Sbjct: 324 MLPERWQKVIDQNGQH 339



 Score = 31.1 bits (67), Expect = 0.006
 Identities = 14/48 (29%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
 Frame = -1

Query: 428 SPSDLHLFR*MAHGLADQHFSSYEEMKNWI----DSKDKEFFRRGIRL 297
           +PSD  LFR + + L  ++F++ +++K+++     +K+++F+ RGI +
Sbjct: 277 APSDYFLFRSLQNSLNGKNFNNDDDIKSYLIQFFANKNQKFYERGIMM 324


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 472 WEILPQPP 449
           W++LP PP
Sbjct: 142 WDVLPHPP 149


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 283 WAKVVANDGHYFDTYV 236
           WA+V  N+G +   +V
Sbjct: 126 WARVHVNEGQFLKAFV 141


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 203 NLMLFYYKPIT 235
           N M FYY P T
Sbjct: 287 NFMRFYYNPFT 297


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 203 NLMLFYYKPIT 235
           N M FYY P T
Sbjct: 158 NFMRFYYNPFT 168


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 203 NLMLFYYKPIT 235
           N M FYY P T
Sbjct: 287 NFMRFYYNPFT 297


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,399
Number of Sequences: 438
Number of extensions: 2429
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)