Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B04
(523 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.045
SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subuni... 29 0.56
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 1.7
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 27 1.7
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 3.9
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 26 3.9
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.9
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 26 3.9
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 25 5.2
SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces pomb... 25 5.2
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 5.2
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 25 6.8
SPBC2D10.09 |||3-hydroxyisobutyryl-CoA hydrolase|Schizosaccharom... 25 6.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 9.0
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 25 9.0
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 25 9.0
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 25 9.0
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 32.3 bits (70), Expect = 0.045
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = -2
Query: 522 TTSTPWSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACI----SFSSSPCGTS 355
++S+ SSS+ SS + + +S ++ S PT ++ I S SSSP TS
Sbjct: 245 SSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTS 304
Query: 354 TNPTSSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKALSMSP 217
+ +SS+ LSS++ S+P S + + S SP
Sbjct: 305 STISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSP 350
Score = 27.5 bits (58), Expect = 1.3
Identities = 26/101 (25%), Positives = 45/101 (44%)
Frame = -2
Query: 522 TTSTPWSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
++S+ SS + SS +P + + +S ++ S PT ++ IS SSS + ++
Sbjct: 264 SSSSSSSSIISSSSSSSSSPTSTSSTI--SSSSSSSSSPTSTSSTISSSSSSSSSFSSTL 321
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKALSMS 220
SS+ S T+S S S+ P S + S S
Sbjct: 322 SSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSS 362
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 432 ASMATESGPTVATACISFSSSPCGTSTNPTSSAPEFFGLYLHLSSTAS 289
+S T S T++++ S SSS ++T+ + S+ F SST+S
Sbjct: 333 SSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSS 380
Score = 25.0 bits (52), Expect = 6.8
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPTS 340
+S+P SSS SS +P ++ +S ++ S + ++ S SSS TS++ +S
Sbjct: 333 SSSPTSSSSTISSSSS-SPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTL-TSSSSSS 390
Query: 339 SAPEFFGLYLH-LSSTASYGYDFSVSTPPLSLMYLKALS 226
S P + LSS S S S P S Y + S
Sbjct: 391 SRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTS 429
>SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subunit
Cwg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 28.7 bits (61), Expect = 0.56
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 312 LHLSSTASYGYDFSVSTPPLSLMYLKALSMSPPLQPLFPYA-LEQSIRFCSDSDTRYPVF 136
L++++T + DFS+S P S+ Y+K+ L PY FC+ + + +
Sbjct: 152 LYMATTIASLLDFSLSDPLCSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALAS--WSLI 209
Query: 135 LKCCPSS 115
LK P+S
Sbjct: 210 LKMIPNS 216
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 1.3
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 522 TTSTPWSSSVEEQFSSK*TPL-E*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNP 346
T++T SSS+ SS TPL N ++ AT S T+ + SS+P T +
Sbjct: 236 TSATATSSSISSTVSSS-TPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSS 294
Query: 345 TSSAPEFFGLYLHLSSTASYGYDFSVSTP 259
+S L+S S + STP
Sbjct: 295 ANSTTATSASSTPLTSVNSTTTTSASSTP 323
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = -2
Query: 432 ASMATESGPTVATACISFSSSPCGTSTNPTSSAPEFFGLYLHLSSTASYGYDFSVSTPPL 253
AS ++ + + A++ ++ SSS +STN T+SA S+T+S S ++ L
Sbjct: 70 ASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSL 129
Query: 252 SLMYLKALSMS 220
+ + + S++
Sbjct: 130 ASSSITSSSLA 140
Score = 25.0 bits (52), Expect = 6.8
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = -2
Query: 504 SSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPTSSAPEF 325
+SSV S TPL ++ +T +T S SS+P G ST TSSA
Sbjct: 525 TSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSASSTPFGNST-ITSSASGS 583
Query: 324 FGLYLHLSSTASYGYDFSVSTP 259
G + + +S + SV+TP
Sbjct: 584 TGEFTNTNS-GNGDVSGSVTTP 604
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 1.7
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTP-WSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP SSSV + + N +S A + P + ++ + SS+P +ST
Sbjct: 1616 TSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVN 1675
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
+S P ++ S+ + + STP S L +
Sbjct: 1676 TSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNS 1712
Score = 26.6 bits (56), Expect = 2.2
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*-NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
+STP +SS S+ T N +S A + + ++ + SS+P +ST
Sbjct: 1556 SSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALN 1615
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKALSMSPPL 211
+S P L+ S+ + + STP S AL+ SPP+
Sbjct: 1616 TSTPITSSSVLNSSTPITSSTVLNSSTPITS---STALNTSPPI 1656
Score = 26.2 bits (55), Expect = 3.0
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*-NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP +SS S+ T L N +S S + ++ + +S+P +ST
Sbjct: 2552 TSTPITSSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVN 2611
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTP 259
SS P L+ S+ + + STP
Sbjct: 2612 SSTPITSSTALNTSTPITSSSVLNSSTP 2639
Score = 25.8 bits (54), Expect = 3.9
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTP-WSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP SSSV + + N +S S + ++ + SS+P +ST
Sbjct: 2396 TSTPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVN 2455
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
SS P L+ S+ + + STP S L +
Sbjct: 2456 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNS 2492
Score = 25.4 bits (53), Expect = 5.2
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*-NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP +SS S+ T N +S A + + ++ + SS+P +ST
Sbjct: 1724 TSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALN 1783
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
+S P L+ S+ + + STP S L +
Sbjct: 1784 TSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNS 1820
Score = 25.4 bits (53), Expect = 5.2
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*-NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP +SS S+ T N +S + + ++ + SS+P +ST
Sbjct: 2768 TSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 2827
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
SS P L+ S+ + + STP S L +
Sbjct: 2828 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNS 2864
Score = 25.0 bits (52), Expect = 6.8
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*-NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP +SS S+ T N +S A + + ++ + SS+P +ST
Sbjct: 632 TSTPITSSSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALN 691
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
+S P L+ S+ + + STP S L +
Sbjct: 692 TSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNS 728
Score = 25.0 bits (52), Expect = 6.8
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*-NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP +SS S+ T N +S A + + ++ + SS+P +ST
Sbjct: 836 TSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVN 895
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
+S P ++ S+ + + STP S L +
Sbjct: 896 TSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNS 932
Score = 25.0 bits (52), Expect = 6.8
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTP-WSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP SSSV ++ + N +S S + ++ + +S+P +ST
Sbjct: 1004 TSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVN 1063
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
SS P L+ S+ + + STP S L +
Sbjct: 1064 SSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNS 1100
Score = 25.0 bits (52), Expect = 6.8
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTP-WSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP SSSV + + N +S S + ++ + SS+P +ST
Sbjct: 1700 TSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALN 1759
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
+S P L+ S+ + + STP S L +
Sbjct: 1760 TSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNS 1796
Score = 25.0 bits (52), Expect = 6.8
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TP-LE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
+STP +SS S+ T N +S S + ++ + SS+P +ST
Sbjct: 1892 SSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVN 1951
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
SS P L+ S+ + + STP S L +
Sbjct: 1952 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNS 1988
Score = 25.0 bits (52), Expect = 6.8
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TP-LE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
+STP +SS S+ T N +S S + ++ + SS+P +ST
Sbjct: 2084 SSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVN 2143
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
SS P L+ S+ + + STP S L +
Sbjct: 2144 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNS 2180
Score = 25.0 bits (52), Expect = 6.8
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = -2
Query: 519 TSTP-WSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP SSSV + + N +S S + ++ + SS+P +S+
Sbjct: 2480 TSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLN 2539
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKALSMSPPL 211
SS P ++ S+ + + STP S L AL+ S P+
Sbjct: 2540 SSTPITSSTVVNTSTPITSSTVVNSSTPITS---LTALNSSTPI 2580
Score = 25.0 bits (52), Expect = 6.8
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTP-WSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP SSSV ++ + N +S S + ++ I SS+P +S+
Sbjct: 3308 TSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLN 3367
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
SS P ++ S+ + + STP S L +
Sbjct: 3368 SSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNS 3404
Score = 24.6 bits (51), Expect = 9.0
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TP-LE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP +SS S+ T N +S S + ++ + SS+P +S+
Sbjct: 1052 TSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLN 1111
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
SS P ++ S+ + + STP S L +
Sbjct: 1112 SSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNS 1148
Score = 24.6 bits (51), Expect = 9.0
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TP-LE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
TSTP +SS S+ T N +S S + ++ + SS+P +ST
Sbjct: 3020 TSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALN 3079
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
+S P L+ S+ + + STP S L +
Sbjct: 3080 TSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNS 3116
Score = 24.6 bits (51), Expect = 9.0
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -2
Query: 519 TSTPWSSSVEEQFSSK*TPLE*-NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPT 343
+STP +SS S+ T N +S S + ++ + SS+P +ST
Sbjct: 3152 SSTPITSSTTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSSTTLN 3211
Query: 342 SSAPEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKA 232
+S P L+ S+ + + STP S L +
Sbjct: 3212 TSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNS 3248
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 1.7
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = -2
Query: 510 PWSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPTSSAP 331
P SSS+E FS T N + ++++ P +A IS S+P + N SS
Sbjct: 113 PNSSSLEPVFSPIVTAKIENALLKYKSTILRHQSPLLANTSISSFSAPIDANINSYSSFS 172
Query: 330 EFFGLYLHLSSTASYGYDFSVSTPP 256
+ Y + +G+ T P
Sbjct: 173 DPASSYKPSLPSVPFGFQHISGTSP 197
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 3.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 516 STPWSSSVEEQFSSK*TPLE*NWK-VVCEASMATESGPTVATACISFSSSPCGTSTNPTS 340
ST +S+ E+Q + TP ++ A ++ T +F S P G+ST PTS
Sbjct: 377 STAETSAEEKQMETYKTPTHAALSDIISTHDYALDANSASQTKKAAFGS-PIGSSTYPTS 435
Query: 339 SAPEFF 322
S F+
Sbjct: 436 SPAPFW 441
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 353 VDVPQGDEEKLMQAVATVGPLSVAID 430
+D+P G E L+ A T P SVA+D
Sbjct: 237 IDLPAGPSEVLVIADETCNPESVALD 262
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 3.9
Identities = 32/113 (28%), Positives = 48/113 (42%)
Frame = -2
Query: 516 STPWSSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPTSS 337
S+ SSS+ SS + V +S ++ + ATA S SSS +S++ TS
Sbjct: 15 SSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSP 74
Query: 336 APEFFGLYLHLSSTASYGYDFSVSTPPLSLMYLKALSMSPPLQPLFPYALEQS 178
A F L +SS++ S S S L + S + P +AL S
Sbjct: 75 ASSSFITSL-VSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSS 126
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +2
Query: 116 LEGQHFRKTGYLVSLSEQNLIDCSSAYGNNGCNGGLMDNAFKYIKDNGG---VDTEKSYP 286
L G F TG L +L+ Q D YG + F + +N G V+T K +
Sbjct: 241 LSGISFVITGILETLTRQEATDLIKQYGGKVTGAPSVRTDFILLGENAGPRKVETIKQHK 300
Query: 287 YEAVDD 304
A+++
Sbjct: 301 IPAINE 306
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -2
Query: 303 SSTASYGYDFSVSTPPLSLMYLKALSMSPPLQPLFPYALEQSIRF 169
+ST+ Y S + P S ++ ++ PP QP+ + + + F
Sbjct: 628 TSTSFTSYTVSATATPTSTSHIPIPTVLPPTQPVLEPSYREIVAF 672
>SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 25.4 bits (53), Expect = 5.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 156 DTRYPVFLKCCPSSDP 109
D YP+F+ C P+ DP
Sbjct: 154 DVVYPIFITCDPARDP 169
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -2
Query: 432 ASMATESGPTVATACISFSSSPCGTSTNPTSSAPEFFGLYLHLSSTASYGYDFSVSTPPL 253
+S + + P+ + + FSSS TST P SS+ G + + TAS S S+
Sbjct: 204 SSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSS--GAIVSNAKTASTDDSSSASSATS 261
Query: 252 SL 247
S+
Sbjct: 262 SV 263
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 405 TVATACISFSSSPCGTSTNPTSSAPEFFGLYL 310
T C S ++ TS SS+ EF GLYL
Sbjct: 139 TGKVVCFSVNTGEVRTSFTVPSSSREFSGLYL 170
>SPBC2D10.09 |||3-hydroxyisobutyryl-CoA
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 342 SSAPEFFGLYLHLSSTASYGYD 277
S P +FG YL L+S GYD
Sbjct: 205 SRLPGYFGTYLGLTSQIVKGYD 226
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -2
Query: 504 SSSVEEQFSSK*TPLE*NWKVVCEASMATESGPTVATACISFSSSPCGTSTNPTSSA 334
SSS+ FSS + L + S++ S T +T + +SSP S++ +SS+
Sbjct: 566 SSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSS 622
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 116 LEGQHFRKTGYLVSLSEQNLIDCSSAYGNNGCNGGL 223
+EG++ + ++S S + + +S+ G NG NGG+
Sbjct: 1 MEGENSKSVHPILSHSTSVVSERASSSGVNGTNGGM 36
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 215 GGLMDNAFKYIKDNGGVDTEKSY 283
G L ++ K+I+DNGG+ T + +
Sbjct: 273 GELTNSMVKFIQDNGGIVTVEDF 295
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 410 PLSVAIDASQTTFQFYSSGVYFDENCSSTELDHG 511
P S + D + +F +SSG + DE + ++ D G
Sbjct: 173 PTSFSNDLKKPSFNSFSSGSFDDEFSAPSDEDEG 206
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 432 ASMATESGPTVATACISFSSSPCGTSTNPTSSAPEFFGLYLHLSSTASYGYDFSVSTPPL 253
+S ++E T+ S SSS + TSSA L +SS++S ++S S+ P+
Sbjct: 38 SSGSSEFTSTITPETPSSSSSTFVPISTHTSSATNTTSGQLSISSSSSTSSEYSSSSIPI 97
Query: 252 S 250
+
Sbjct: 98 T 98
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,518,844
Number of Sequences: 5004
Number of extensions: 31477
Number of successful extensions: 282
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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