Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B02
(354 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 35 0.063
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 35 0.063
BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein. 35 0.063
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 35 0.063
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 35 0.083
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 33 0.33
EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein. 33 0.33
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 33 0.33
AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD... 33 0.33
EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein. 31 1.3
BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding pro... 29 3.1
AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding pro... 29 3.1
AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding pro... 29 3.1
AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding pro... 29 3.1
BC021144-1|AAH21144.1| 740|Homo sapiens FLJ30092 protein protein. 28 7.2
AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protei... 28 7.2
AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein. 28 7.2
Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein. 28 9.5
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 28 9.5
L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein. 28 9.5
AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or mix... 28 9.5
AY354203-1|AAQ63888.1| 1013|Homo sapiens RAN-binding protein 2-l... 28 9.5
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 28 9.5
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 28 9.5
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 28 9.5
AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or mix... 28 9.5
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 279
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 514
Query: 280 DAEESNDATENGDVTEV 330
+ S+D E T +
Sbjct: 515 EELMSSDLEETAGSTSI 531
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 279
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 514
Query: 280 DAEESNDATENGDVTEV 330
+ S+D E T +
Sbjct: 515 EELMSSDLEETAGSTSI 531
>BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein.
Length = 174
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 279
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 37 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 94
Query: 280 DAEESNDATENGDVTEV 330
+ S+D E T +
Sbjct: 95 EELMSSDLEETAGSTSI 111
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 279
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 514
Query: 280 DAEESNDATENGDVTEV 330
+ S+D E T +
Sbjct: 515 EELMSSDLEETAGSTSI 531
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 34.7 bits (76), Expect = 0.083
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 279
+A A+ E + PEE T E P KK K EVP+ NG E+ + +
Sbjct: 465 LALASSENSSSTPEECEETS--EKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 522
Query: 280 DAEESNDATENGDVTEV 330
+ S+D E T +
Sbjct: 523 EELMSSDLEETAGSTSI 539
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 234
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 652
>EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein.
Length = 916
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 234
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 652
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 234
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 652
>AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD
medium) protein.
Length = 260
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 234
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 165 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 215
>EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein.
Length = 877
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKE 228
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEE 650
>BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 300
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 301 ATENGDVTEVKETGVK 348
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 300
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 301 ATENGDVTEVKETGVK 348
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 300
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 301 ATENGDVTEVKETGVK 348
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 300
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 301 ATENGDVTEVKETGVK 348
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>BC021144-1|AAH21144.1| 740|Homo sapiens FLJ30092 protein protein.
Length = 740
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 213
+K P+ ++ E +KSPTKK EVPE
Sbjct: 117 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 148
>AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protein
phosphatase protein.
Length = 1381
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 213
+K P+ ++ E +KSPTKK EVPE
Sbjct: 758 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 789
>AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein.
Length = 3006
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 213
+K P+ ++ E +KSPTKK EVPE
Sbjct: 2383 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 2414
>Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.
Length = 4005
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 166 ESPIKKSPTKKTEVPESNGKENGT 237
++ + + K +++P+ NGKENGT
Sbjct: 2763 DTSVTATTRKSSQIPKRNGKENGT 2786
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 294
E+ D+ E + +T K + K P K V E +E + D E+
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 261
Query: 295 NDATENGDVTEVKETGVKRK 354
+ E + VKE KRK
Sbjct: 262 EEEEEEEEEEPVKEAPGKRK 281
>L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein.
Length = 3969
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 166 ESPIKKSPTKKTEVPESNGKENGT 237
++ + + K +++P+ NGKENGT
Sbjct: 2727 DTSVTATTRKSSQIPKRNGKENGT 2750
>AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
protein.
Length = 3969
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 166 ESPIKKSPTKKTEVPESNGKENGT 237
++ + + K +++P+ NGKENGT
Sbjct: 2727 DTSVTATTRKSSQIPKRNGKENGT 2750
>AY354203-1|AAQ63888.1| 1013|Homo sapiens RAN-binding protein 2-like
1 short isoform protein.
Length = 1013
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 121 KQDAAPEEVTSTEVKESPIKKSPTKK 198
++DA + V+S+ V +SP+ SP +K
Sbjct: 504 REDALDDNVSSSSVHDSPLASSPVRK 529
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 294
E+ D+ E + +T K + K P K V E +E + D E+
Sbjct: 179 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 238
Query: 295 NDATENGDVTEVKETGVKRK 354
+ E + VKE KRK
Sbjct: 239 EEEEEEEEEEPVKEAPGKRK 258
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 103 ADAAVEKQDAAPEEVTSTEVKESPIKKSP---TKKTEVP 210
A+ E + AAP +VT K P KK+P KK E+P
Sbjct: 11606 AEVVEEPEPAAPPQVTVPPKKPVPEKKAPAVVAKKPELP 11644
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 294
E+ D+ E + +T K + K P K V E +E + D E+
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 261
Query: 295 NDATENGDVTEVKETGVKRK 354
+ E + VKE KRK
Sbjct: 262 EEEEEEEEEEPVKEAPGKRK 281
>AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
vari protein.
Length = 2880
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 166 ESPIKKSPTKKTEVPESNGKENGT 237
++ + + K +++P+ NGKENGT
Sbjct: 1638 DTSVTATTRKSSQIPKRNGKENGT 1661
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.299 0.119 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,365,306
Number of Sequences: 237096
Number of extensions: 511705
Number of successful extensions: 1030
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.6 bits)
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