Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_B02
(354 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 34 0.025
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 34 0.025
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 34 0.025
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 34 0.025
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.31
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.31
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.31
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 0.40
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 30 0.53
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 30 0.53
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 0.71
U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific ... 29 0.93
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 28 1.6
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 1.6
AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical ... 28 1.6
AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical ... 28 2.2
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 27 3.8
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 27 3.8
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 27 5.0
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 26 6.6
U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical pr... 26 6.6
U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 26 8.7
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 213
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 121 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 228
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 219
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 234
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 231
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 213
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 121 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 228
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 219
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 234
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 231
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 213
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 121 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 228
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 219
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 234
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 231
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 213
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 121 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 228
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 219
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 234
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 228
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 231
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK + + ++ S E V+E P KK KKTE +S+ + + ++
Sbjct: 9493 LEKDEKSNKDSGSNETVEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQK 9552
Query: 292 SNDATENGDVTEVKE 336
DAT T+ K+
Sbjct: 9553 VADATSKQKETDKKQ 9567
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK D + ++ S E V E P KK KKTE +S+ + + ++
Sbjct: 9743 LEKDDKSTKDSESKETVDEKPKKKVLKKKTEKSDSSISQKSVTSKTVVESGGPSESETQK 9802
Query: 292 SNDATENGDVTEVKE 336
DA T+ K+
Sbjct: 9803 VADAARKQKETDEKQ 9817
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 297
E + EE V E P KK KKTE +S+ + + + ++ +
Sbjct: 9966 ETKSKKTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVS 10025
Query: 298 DATENGDVTEVKETGVKRK 354
+A + + KE+ K+K
Sbjct: 10026 EADK---AHKQKESDEKQK 10041
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK + + ++ S E V+E P KK KKTE +S+ + + ++
Sbjct: 9513 LEKDEKSNKDSGSNETVEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQK 9572
Query: 292 SNDATENGDVTEVKE 336
DAT T+ K+
Sbjct: 9573 VADATSKQKETDKKQ 9587
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK D + ++ S E V E P KK KKTE +S+ + + ++
Sbjct: 9763 LEKDDKSTKDSESKETVDEKPKKKVLKKKTEKSDSSISQKSVTSKTVVESGGPSESETQK 9822
Query: 292 SNDATENGDVTEVKE 336
DA T+ K+
Sbjct: 9823 VADAARKQKETDEKQ 9837
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK + + +E S E V E P KK KKTE +S+ + + ++
Sbjct: 13396 LEKDEKSTKESESKETVDEKPKKKVLKKKTEKSDSSISQKSETSKTVVESAGPSESETQK 13455
Query: 292 SNDATENGDVTEVKE 336
DA T+ K+
Sbjct: 13456 VADAARKQKETDEKQ 13470
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 297
E + EE V E P KK KKTE +S+ + + + ++ +
Sbjct: 9986 ETKSKKTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVS 10045
Query: 298 DATENGDVTEVKETGVKRK 354
+A + + KE+ K+K
Sbjct: 10046 EADK---AHKQKESDEKQK 10061
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK + + ++ S E V+E P KK KKTE +S+ + + ++
Sbjct: 9513 LEKDEKSNKDSGSNETVEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQK 9572
Query: 292 SNDATENGDVTEVKE 336
DAT T+ K+
Sbjct: 9573 VADATSKQKETDKKQ 9587
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK D + ++ S E V E P KK KKTE +S+ + + ++
Sbjct: 9763 LEKDDKSTKDSESKETVDEKPKKKVLKKKTEKSDSSISQKSVTSKTVVESGGPSESETQK 9822
Query: 292 SNDATENGDVTEVKE 336
DA T+ K+
Sbjct: 9823 VADAARKQKETDEKQ 9837
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 115 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 291
+EK + + +E S E V E P KK KKTE +S+ + + ++
Sbjct: 13396 LEKDEKSTKESESKETVDEKPKKKVLKKKTEKSDSSISQKSETSKTVVESAGPSESETQK 13455
Query: 292 SNDATENGDVTEVKE 336
DA T+ K+
Sbjct: 13456 VADAARKQKETDEKQ 13470
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 297
E + EE V E P KK KKTE +S+ + + + ++ +
Sbjct: 9986 ETKSKKTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVS 10045
Query: 298 DATENGDVTEVKETGVKRK 354
+A + + KE+ K+K
Sbjct: 10046 EADK---AHKQKESDEKQK 10061
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 109 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 237
A VE ++ + E EV+ESPIKK T + +S K T
Sbjct: 459 AKVESEEPSDNEEEEEEVEESPIKKDKTPRKYSRKSAAKVEST 501
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/52 (23%), Positives = 22/52 (42%)
Frame = +1
Query: 139 EEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 294
EE + E +E +++SP KK + P +++ + EES
Sbjct: 464 EEPSDNEEEEEEVEESPIKKDKTPRKYSRKSAAKVESTESSGNEEEEEVEES 515
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 KESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDA-TENGDVTEVKET 339
+E +++SP KK + P + K++ AEE+N + TE+ ++ E+
Sbjct: 609 EEEEVEESPKKKGKTPRKSSKKSAAKEESEESSDDEEEEQAEETNGSHTESPTKSKTDES 668
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 231
D E + P E T+ +VK+ K+SP KK +S GKEN
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 106 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 231
D E + P E T+ +VK+ K+SP KK +S GKEN
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 139 EEVTSTEVKESPIKKSPTKKTEVPESNG-KENGTXXXXXXXXXXXXNGDAEESNDATENG 315
E + ++ + P ++ E PE N E+ + +++S+DA+EN
Sbjct: 6 ESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEKAADSPESSSDQSDDSDDASENS 65
Query: 316 DVTEVKETGVKRK 354
+E E K+K
Sbjct: 66 SSSEPDEPAPKKK 78
>U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific
transcript protein20 protein.
Length = 231
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 100 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGK 225
M+D K AA + +S+ +K IKKSPT+K+E + + K
Sbjct: 156 MSDIEKSKSRAASKSNSSSSIKS--IKKSPTEKSENTDRSSK 195
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKT 201
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKT 201
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKT 201
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 231
EK+D E+ +S KKS KKTE +S+ K+N
Sbjct: 268 EKKDDKKEDDKEKSATKSEDKKSDEKKTEEKKSDEKKN 305
>AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical
protein Y38E10A.7 protein.
Length = 286
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +1
Query: 184 SPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKETGVK 348
SPT +T V +G N NG +EE+ AT GD T VK
Sbjct: 60 SPTTRTPVILVHGTTNSAGTFAPQAAYFRANGWSEETVYATTYGDAGVTTATNVK 114
>AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical
protein ZK484.3 protein.
Length = 332
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 130 AAPEEVTSTEVKESPIKKS-PTKKTEVPESNGKENGT 237
AA T T +K++PIKKS P+ +E + K+ G+
Sbjct: 119 AAAAAATLTSMKKAPIKKSVPSTSSEADSTTPKKKGS 155
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKT--EVPESNGKEN 231
+ Q P+ + E E+PIKK P + EV E N +E+
Sbjct: 25 QHQQTQPQPLPEEEQPENPIKKDPKPEVLEEVVEKNREED 64
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKT--EVPESNGKEN 231
+ Q P+ + E E+PIKK P + EV E N +E+
Sbjct: 25 QHQQTQPQPLPEEEQPENPIKKDPKPEVLEEVVEKNREED 64
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 103 ADAAVEKQDAAPEEVTSTEVKESPIKKSPTK 195
A+ EK++ P+EVT + KE +K+ TK
Sbjct: 96 AEKEEEKEEKPPKEVTEEKEKEKEREKTKTK 126
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 142 EVTSTEVKESPIKKSPTKKTEVPESNGKENGT 237
E T+T V+E +K SP+ T+ +G +GT
Sbjct: 82 EPTTTPVEEEKVKVSPSSSTKEYPDDGGYDGT 113
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 160 VKESPIKKSPTKKTEVPESNGKENG 234
VK SP+ KSP K + + + K+ G
Sbjct: 687 VKSSPVNKSPVKSSPIKKEAEKKKG 711
>U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical
protein D1073.1b protein.
Length = 647
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 145 VTSTEVKESPIKKSPTKKTEVPESNGKENG 234
V T P+ S + +VP NGK NG
Sbjct: 580 VAETSFTTDPLNSSEIEVNDVPTENGKVNG 609
>U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical
protein D1073.1a protein.
Length = 510
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 145 VTSTEVKESPIKKSPTKKTEVPESNGKENG 234
V T P+ S + +VP NGK NG
Sbjct: 443 VAETSFTTDPLNSSEIEVNDVPTENGKVNG 472
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/70 (21%), Positives = 25/70 (35%)
Frame = +1
Query: 118 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 297
++ D EE + +E + ++ E P +EN G E N
Sbjct: 3824 DETDKEDEEAIEGDGEEDQNEDQNDQELEDPTQTNEENEDSEEQKKEDEALEQGTGGEKN 3883
Query: 298 DATENGDVTE 327
D +N DV +
Sbjct: 3884 DQDDNKDVAD 3893
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.299 0.119 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,843,597
Number of Sequences: 27780
Number of extensions: 88335
Number of successful extensions: 378
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.6 bits)
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