Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_A08
         (333 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   3.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   3.0  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   3.9  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   3.9  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   5.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   6.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   6.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   9.1  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 176 WPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 69
           W + +   L++L   +YL  + L   DV     LLD
Sbjct: 696 WLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLD 731


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 176 WPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 69
           W + +   L++L   +YL  + L   DV     LLD
Sbjct: 734 WLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLD 769


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 164 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 66
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102



 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 112 SSTQMMFCLLSLFSMSELE 56
           S T  M+CLL  FS+ + E
Sbjct: 69  SITCYMYCLLEAFSLVDDE 87


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 164 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 66
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102



 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 112 SSTQMMFCLLSLFSMSELE 56
           S T  M+CLL  FS+ + E
Sbjct: 69  SITCYMYCLLEAFSLVDDE 87


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 129 FTVGEKFKYASNFLWPFKLN 188
           F+ GE+ + +SNFL P K++
Sbjct: 142 FSTGERCRISSNFL-PNKMH 160


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 185 QFEWPQEVTCVLELLTD 135
           QFE   ++T  LELLTD
Sbjct: 348 QFEADYKLTRNLELLTD 364


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 185 QFEWPQEVTCVLELLTD 135
           QFE   ++T  LELLTD
Sbjct: 348 QFEADYKLTRNLELLTD 364


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 134 SKYLMDEILNADDVLFAKSLLDE*VG 57
           +KY+   ++NA  +  A ++L E  G
Sbjct: 3   AKYVFTTLINAAFLCLASTILSESAG 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,318
Number of Sequences: 438
Number of extensions: 1218
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)