Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_A06
         (480 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
 Frame = -2

Query: 191 GGTFISENHMFSKRGHRETRKLLKKEDYEM-----PWILVFIMLGDHCVTKIQCYLTENS 27
           G TF +      K      R LL  +DY+       W  V +  G      +   LT   
Sbjct: 90  GTTFSNSISQLRKEVSLLYRILLGAKDYQTFLKTAAWARVHVNEGQFLKAFVAAVLTRQD 149

Query: 26  RQSIYFP 6
            QS+ FP
Sbjct: 150 TQSVIFP 156


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 317  GYQTENVIYSLQQGGWPCNLFEFDRSQCMREET 415
            G+ TE+++ +  +     N+F  D + CM ++T
Sbjct: 1417 GFSTEDILDTADEDLLINNVFYEDETSCMLDKT 1449


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 77  LGDHCVTKIQCYLTENSRQSIYFP 6
           + DHCVT  Q  +  N   +I  P
Sbjct: 819 INDHCVTTEQSVVVTNVTTTINTP 842


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,157
Number of Sequences: 438
Number of extensions: 2523
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)