Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_A04
         (443 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018644-1|AAH18644.1|  140|Homo sapiens nudix (nucleoside dipho...    56   7e-08
AK123561-1|BAC85646.1|  236|Homo sapiens protein ( Homo sapiens ...    56   7e-08
BC011996-1|AAH11996.1|  379|Homo sapiens calcium binding tyrosin...    31   1.8  
AF295038-1|AAG17890.1|  281|Homo sapiens testis-specific calcium...    31   1.8  
AF295037-1|AAG17889.1|  379|Homo sapiens testis-specific calcium...    31   1.8  

>BC018644-1|AAH18644.1|  140|Homo sapiens nudix (nucleoside
           diphosphate linked moiety X)-type motif 8 protein.
          Length = 140

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
 Frame = +3

Query: 240 LSGLALKNESSVVRASVLVPICVVKGDVCILYTLRSLNLNS-PSGQVSYPGGKRD-HNET 413
           L+G   +  +    A+VLVP+C V+G   +LYTLRS  L     G VS+PGGK D  ++ 
Sbjct: 18  LAGATARLRARPASAAVLVPLCSVRGVPALLYTLRSSRLTGRHKGDVSFPGGKCDPADQD 77

Query: 414 ATETALRETK 443
              TALRET+
Sbjct: 78  VVHTALRETR 87


>AK123561-1|BAC85646.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41567 fis, clone CTONG2001877. ).
          Length = 236

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
 Frame = +3

Query: 240 LSGLALKNESSVVRASVLVPICVVKGDVCILYTLRSLNLNS-PSGQVSYPGGKRD-HNET 413
           L+G   +  +    A+VLVP+C V+G   +LYTLRS  L     G VS+PGGK D  ++ 
Sbjct: 18  LAGATARLRARPASAAVLVPLCSVRGVPALLYTLRSSRLTGRHKGDVSFPGGKCDPADQD 77

Query: 414 ATETALRETK 443
              TALRET+
Sbjct: 78  VVHTALRETR 87


>BC011996-1|AAH11996.1|  379|Homo sapiens calcium binding
           tyrosine-(Y)-phosphorylation regulated (fibrousheathin
           2) protein.
          Length = 379

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 207 SRIRLIKKLKDLSGLALKNESSVVR-ASVLVPICVVKGDVCILYTLRSLNLNSPSGQ 374
           S ++  +  K L G A+ ++S V+R  ++ VPI V   +    +TL   N N PSGQ
Sbjct: 265 SNVQEAQGWKPLPGHAVVSQSDVLRYVAMQVPIAVPADEKYQKHTLSPQNANPPSGQ 321


>AF295038-1|AAG17890.1|  281|Homo sapiens testis-specific
           calcium-binding protein CBP86-III protein.
          Length = 281

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 207 SRIRLIKKLKDLSGLALKNESSVVR-ASVLVPICVVKGDVCILYTLRSLNLNSPSGQ 374
           S ++  +  K L G A+ ++S V+R  ++ VPI V   +    +TL   N N PSGQ
Sbjct: 167 SNVQEAQGWKPLPGHAVVSQSDVLRYVAMQVPIAVPADEKYQKHTLSPQNANPPSGQ 223


>AF295037-1|AAG17889.1|  379|Homo sapiens testis-specific
           calcium-binding protein CBP86-II protein.
          Length = 379

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 207 SRIRLIKKLKDLSGLALKNESSVVR-ASVLVPICVVKGDVCILYTLRSLNLNSPSGQ 374
           S ++  +  K L G A+ ++S V+R  ++ VPI V   +    +TL   N N PSGQ
Sbjct: 265 SNVQEAQGWKPLPGHAVVSQSDVLRYVAMQVPIAVPADEKYQKHTLSPQNANPPSGQ 321


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,986,962
Number of Sequences: 237096
Number of extensions: 999810
Number of successful extensions: 1720
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)