Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_A04
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      25   0.49 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.65 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   2.6  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   4.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   4.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   4.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 358 ILPVVKCHILE--GKEIITKLPLKQHSER 438
           +LP   C+  +  GK + TKL LK+H E+
Sbjct: 365 LLPPGVCYTCDVCGKTLSTKLTLKRHKEQ 393


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 14/60 (23%), Positives = 32/60 (53%)
 Frame = +3

Query: 228 KLKDLSGLALKNESSVVRASVLVPICVVKGDVCILYTLRSLNLNSPSGQVSYPGGKRDHN 407
           K + L  +A  ++  + R+  LVP+  +KGD   +  ++  N ++   +++Y  G  D++
Sbjct: 177 KCEVLYDIAPLSDFVIHRSPELVPMPTLKGDGRHMEVIKIKNFDNCDQRINYHFGMTDNS 236


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 210 RIRLIKKLKDLSGLALKNESSVVRASVLVPIC--VVKGDVCILYTLRSLNL 356
           +I+   + KD++   L NES +++   +V I   V  G   +L  LR+ ++
Sbjct: 120 KIKKTMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSI 170


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +3

Query: 159 D*TIMSLSPEVLLTHQSRIRLIKKLKDLSGLALKNESSVVRASVLVPICVVKGDVCILY 335
           D T   L  +V + H   +        LS LA+++      +  +V I   KG+  I+Y
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLIVY 216


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +3

Query: 159 D*TIMSLSPEVLLTHQSRIRLIKKLKDLSGLALKNESSVVRASVLVPICVVKGDVCILY 335
           D T   L  +V + H   +        LS LA+++      +  +V I   KG+  I+Y
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLIVY 216


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +3

Query: 159 D*TIMSLSPEVLLTHQSRIRLIKKLKDLSGLALKNESSVVRASVLVPICVVKGDVCILY 335
           D T   L  +V + H   +        LS LA+++      +  +V I   KG+  I+Y
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLIVY 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,506
Number of Sequences: 438
Number of extensions: 2421
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)