Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_A03
         (489 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067117-1|AAH67117.1|  380|Homo sapiens SH2D4A protein protein.       30   4.9  
AY071904-1|AAL60586.1|  461|Homo sapiens ribonuclease/angiogenin...    29   6.5  
BC018710-1|AAH18710.1|  521|Homo sapiens family with sequence si...    29   8.6  
AK056319-1|BAB71148.1|  521|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>BC067117-1|AAH67117.1|  380|Homo sapiens SH2D4A protein protein.
          Length = 380

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -2

Query: 224 PWRIWWSV---SPTLLTERSNFM*SVRRFGKTPRTWS 123
           PWRIWW++   +P+L   RS+F   V        TWS
Sbjct: 304 PWRIWWNITRRNPSLPWGRSSFSIPVVSRTSCLTTWS 340


>AY071904-1|AAL60586.1|  461|Homo sapiens ribonuclease/angiogenin
           inhibitor protein.
          Length = 461

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -3

Query: 277 QDAWVSNYCRPVHACCHYHGEYGGAFHPRFSLSAQISCNQLED---SERLRGPG 125
           +  WV + C    ACC +          RF L  QIS N+LED   +E  +GPG
Sbjct: 316 ESLWVKS-CSFTAACCSHFSSV--LAQNRFLLELQISNNRLEDAGVAELCQGPG 366


>BC018710-1|AAH18710.1|  521|Homo sapiens family with sequence
           similarity 126, member A protein.
          Length = 521

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 392 MACRYAKRIYIPSGALTALVIFCSPLCPCSIP 297
           + C  A   Y+PS +L +L   CS +C C  P
Sbjct: 185 LLCYNAALTYMPSVSLQSLCQICSRICVCGYP 216


>AK056319-1|BAB71148.1|  521|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31757 fis, clone NT2RI2007572. ).
          Length = 521

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 392 MACRYAKRIYIPSGALTALVIFCSPLCPCSIP 297
           + C  A   Y+PS +L +L   CS +C C  P
Sbjct: 185 LLCYNAALTYMPSVSLQSLCQICSRICVCGYP 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,888,646
Number of Sequences: 237096
Number of extensions: 1484196
Number of successful extensions: 7305
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7305
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)