Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P24
         (309 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000102-1|AAH00102.1|  598|Homo sapiens COL4A3BP protein protein.     61   7e-10
AY453386-1|AAR26718.1|  624|Homo sapiens lipid-transfer protein ...    61   7e-10
AY453385-1|AAR26717.1|  598|Homo sapiens lipid-transfer protein ...    61   7e-10
AK091851-1|BAC03762.1|  598|Homo sapiens protein ( Homo sapiens ...    61   7e-10
AF232930-1|AAG42046.1|  598|Homo sapiens Goodpasture antigen-bin...    61   7e-10
AF136450-1|AAD30288.1|  624|Homo sapiens goodpasture antigen-bin...    61   7e-10
U78110-1|AAC50898.1|  197|Homo sapiens prepro-neurturin protein.       28   6.4  

>BC000102-1|AAH00102.1|  598|Homo sapiens COL4A3BP protein protein.
          Length = 598

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           I   I Y + VNPGGWAPA VLRAV KREYPKFLKR
Sbjct: 547 ILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKR 582


>AY453386-1|AAR26718.1|  624|Homo sapiens lipid-transfer protein
           CERTL protein.
          Length = 624

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           I   I Y + VNPGGWAPA VLRAV KREYPKFLKR
Sbjct: 573 ILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKR 608


>AY453385-1|AAR26717.1|  598|Homo sapiens lipid-transfer protein
           CERT protein.
          Length = 598

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           I   I Y + VNPGGWAPA VLRAV KREYPKFLKR
Sbjct: 547 ILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKR 582


>AK091851-1|BAC03762.1|  598|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34532 fis, clone HLUNG2008235, highly similar to
           Homo sapiens goodpasture antigen-binding protein
           (COL4A3BP) ).
          Length = 598

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           I   I Y + VNPGGWAPA VLRAV KREYPKFLKR
Sbjct: 547 ILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKR 582


>AF232930-1|AAG42046.1|  598|Homo sapiens Goodpasture
           antigen-binding protein D26 protein.
          Length = 598

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           I   I Y + VNPGGWAPA VLRAV KREYPKFLKR
Sbjct: 547 ILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKR 582


>AF136450-1|AAD30288.1|  624|Homo sapiens goodpasture
           antigen-binding protein protein.
          Length = 624

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           I   I Y + VNPGGWAPA VLRAV KREYPKFLKR
Sbjct: 573 ILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKR 608


>U78110-1|AAC50898.1|  197|Homo sapiens prepro-neurturin protein.
          Length = 197

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 50  RLGARGCTTRRLQTRVSEVPKTFTS 124
           RLGAR C  R L+ RVSE+   + S
Sbjct: 97  RLGARPCGLRELEVRVSELGLGYAS 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,566,451
Number of Sequences: 237096
Number of extensions: 698925
Number of successful extensions: 1363
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)