Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P24
         (309 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145644-1|AAD38619.1|  601|Drosophila melanogaster BcDNA.GH0768...    70   7e-13
AE014296-1410|AAF50454.1|  601|Drosophila melanogaster CG7207-PA...    70   7e-13
AE014297-830|AAS65128.1|  707|Drosophila melanogaster CG8379-PB,...    26   8.2  

>AF145644-1|AAD38619.1|  601|Drosophila melanogaster BcDNA.GH07688
           protein.
          Length = 601

 Score = 69.7 bits (163), Expect = 7e-13
 Identities = 29/36 (80%), Positives = 30/36 (83%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           +T  I YCS VNPGGWAPA  LRAVYKREYPKFLKR
Sbjct: 550 LTCKITYCSVVNPGGWAPASALRAVYKREYPKFLKR 585



 Score = 32.7 bits (71), Expect = 0.095
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 110 KTFTSYVVDQCRDKPL 157
           K FT YV+DQC+DKP+
Sbjct: 584 KRFTGYVIDQCKDKPI 599


>AE014296-1410|AAF50454.1|  601|Drosophila melanogaster CG7207-PA
           protein.
          Length = 601

 Score = 69.7 bits (163), Expect = 7e-13
 Identities = 29/36 (80%), Positives = 30/36 (83%)
 Frame = +3

Query: 9   ITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKR 116
           +T  I YCS VNPGGWAPA  LRAVYKREYPKFLKR
Sbjct: 550 LTCKITYCSVVNPGGWAPASALRAVYKREYPKFLKR 585



 Score = 32.7 bits (71), Expect = 0.095
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 110 KTFTSYVVDQCRDKPL 157
           K FT YV+DQC+DKP+
Sbjct: 584 KRFTGYVIDQCKDKPI 599


>AE014297-830|AAS65128.1|  707|Drosophila melanogaster CG8379-PB,
           isoform B protein.
          Length = 707

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 259 LNVPTEPK*YINSIHPLCSLF 197
           L+    PK   NS+H LCSLF
Sbjct: 83  LDTEDHPKRLCNSLHTLCSLF 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,351,770
Number of Sequences: 53049
Number of extensions: 227032
Number of successful extensions: 485
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)