Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P23
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   180   3e-47
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.0  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        23   6.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.9  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  180 bits (437), Expect = 3e-47
 Identities = 79/108 (73%), Positives = 92/108 (85%)
 Frame = +3

Query: 72  MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRGW 251
           MGV +  I+ GD++T+PK GQT VVHYTGTL +G  FDSSR RGKPFKF +GK EVIRGW
Sbjct: 1   MGVQIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGW 60

Query: 252 DEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 395
           DEGVA+MSVG+RAKL C+PDYAYG +GHPGVIPPN+ L FDVELLR+E
Sbjct: 61  DEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 277  WEKEPS*PALRIMHTVNRVILVSFRLILHSY 369
            W+++P  PA   M  V++ +   F+L  +SY
Sbjct: 1076 WQQQPIDPATMRMEKVDQPLGAGFKLAKYSY 1106


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 313  MHTVNRVILVSFRLILHSYLMWNY 384
            ++T N  IL  FRL  H Y ++++
Sbjct: 935  LYTFNDPILSCFRLFNHFYYLFDF 958


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 137 CSCTLHW 157
           CSCT HW
Sbjct: 74  CSCTFHW 80


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +1

Query: 250 GMRVLQKCQWE---KEPS*PALRIMHTVNRVI 336
           G+RV     W    KE +  A RI+H VNR++
Sbjct: 810 GVRVHAHLSWVPHVKEITLKATRIVHAVNRLM 841


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,380
Number of Sequences: 2352
Number of extensions: 8221
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)