Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P23
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 144 2e-35
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 144 2e-35
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 112 1e-25
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 103 4e-23
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 103 7e-23
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 77 4e-15
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 69 1e-12
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 69 1e-12
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z81561-3|CAB04553.2| 350|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 29 1.8
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 29 1.8
AL032652-11|CAA21712.2| 350|Caenorhabditis elegans Hypothetical... 29 1.8
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 28 2.4
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 4.3
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 4.3
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 26 9.8
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 26 9.8
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 144 bits (349), Expect = 2e-35
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +3
Query: 72 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRGW 251
MGV + + GD T PK+GQTV HY TL NGKK DSSRDRG PFKFKIGK EVI+GW
Sbjct: 1 MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 252 DEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIPPNSTLIFDVELL 386
D+GVA+MSVGE++KLT + D YG +G P IP N+TL+F+VELL
Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 144 bits (349), Expect = 2e-35
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +3
Query: 72 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRGW 251
MGV + + GD T PK+GQTV HY TL NGKK DSSRDRG PFKFKIGK EVI+GW
Sbjct: 1 MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 252 DEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIPPNSTLIFDVELL 386
D+GVA+MSVGE++KLT + D YG +G P IP N+TL+F+VELL
Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 112 bits (269), Expect = 1e-25
Identities = 52/88 (59%), Positives = 60/88 (68%)
Frame = +3
Query: 120 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRGWDEGVAKMSVGERAKLT 299
P +G TV VHY GTL NG KFDSSRDRG F F +G+ VI+GWD GVA M+ GE A+ T
Sbjct: 30 PTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFT 89
Query: 300 CTPDYAYGQQGHPGVIPPNSTLIFDVEL 383
DY YG G P IP +TLIF+VEL
Sbjct: 90 IRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 103 bits (248), Expect = 4e-23
Identities = 50/96 (52%), Positives = 63/96 (65%)
Frame = +3
Query: 63 YKIMGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVI 242
Y +GV + + GD T K+GQTV HY L +G K DSSRDR PFKFKIGK EVI
Sbjct: 194 YAKIGVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVI 253
Query: 243 RGWDEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIP 350
+GWD+GVA+MSV E++KLT P + + + P IP
Sbjct: 254 KGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289
Score = 58.0 bits (134), Expect = 3e-09
Identities = 35/94 (37%), Positives = 47/94 (50%)
Frame = +3
Query: 120 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRGWDEGVAKMSVGERAKLT 299
P++GQ V + L + S+ + P FKIG EVI G D G+ KM VGE A
Sbjct: 99 PENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFH 158
Query: 300 CTPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*D 401
+ Y YG+ G G+IP N++L V L D
Sbjct: 159 VSGKYGYGRAGFRGLIPRNASLTCKVRLFNCSWD 192
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 103 bits (246), Expect = 7e-23
Identities = 46/93 (49%), Positives = 63/93 (67%)
Frame = +3
Query: 123 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRGWDEGVAKMSVGERAKLTC 302
+ G + +HYTGTL +G +FDSSR R + F F +G+ VI+GWD+G+ M VGER LT
Sbjct: 43 RKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTI 102
Query: 303 TPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*D 401
P YG++G P IP NS L FDVEL++++ D
Sbjct: 103 PPHLGYGERGAPPKIPGNSVLKFDVELMKIDRD 135
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 77.4 bits (182), Expect = 4e-15
Identities = 38/90 (42%), Positives = 53/90 (58%)
Frame = +3
Query: 123 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRGWDEGVAKMSVGERAKLTC 302
++G T+ YT L +G DSS R +PF FK+G +VI+G D + M GE+ K+
Sbjct: 164 QAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVI 223
Query: 303 TPDYAYGQQGHPGVIPPNSTLIFDVELLRL 392
P+ AYG+ G P IP NS L FD+ L +L
Sbjct: 224 PPELAYGENGRPPAIPGNSYLHFDLSLEKL 253
Score = 44.8 bits (101), Expect = 3e-05
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Frame = +3
Query: 75 GVTVETISP-GDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIR 245
GV +E I GD KS G + Y + GK S+ + KP+ F +GK EVI
Sbjct: 27 GVKIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIH 85
Query: 246 GWDEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIPPNSTLIFDVEL 383
G + + M VGE+ K+ P+ + + G V TL + VEL
Sbjct: 86 GMEIAMEGMCVGEQRKVIIPPEQGFDEDGDE-VEGKGETLYYFVEL 130
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 69.3 bits (162), Expect = 1e-12
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 75 GVTVETISPGDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRG 248
G+ +E DE KS G T+ Y L +G DSS R PF FK+ +EVI+G
Sbjct: 151 GIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKG 210
Query: 249 WDEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIPPNSTLIFDVELLRL 392
D + M GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 211 MDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258
Score = 42.3 bits (95), Expect = 1e-04
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +3
Query: 75 GVTVETISPGDESTYP---KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIR 245
G+ ++ I P P + G + Y + +GK+ S+ ++ KP+ F +GK +VI
Sbjct: 29 GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 87
Query: 246 GWDEGVAKMSVGERAKLTCTPDYAYGQQGHP-GVIPPNSTLIFDVELLRL 392
G + + M GE+ K+ + +G +G I + TL + V+L+ L
Sbjct: 88 GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDL 137
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 69.3 bits (162), Expect = 1e-12
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 75 GVTVETISPGDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRG 248
G+ +E DE KS G T+ Y L +G DSS R PF FK+ +EVI+G
Sbjct: 187 GIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKG 246
Query: 249 WDEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIPPNSTLIFDVELLRL 392
D + M GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 247 MDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294
Score = 42.3 bits (95), Expect = 1e-04
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +3
Query: 75 GVTVETISPGDESTYP---KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIR 245
G+ ++ I P P + G + Y + +GK+ S+ ++ KP+ F +GK +VI
Sbjct: 65 GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 123
Query: 246 GWDEGVAKMSVGERAKLTCTPDYAYGQQGHP-GVIPPNSTLIFDVELLRL 392
G + + M GE+ K+ + +G +G I + TL + V+L+ L
Sbjct: 124 GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDL 173
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 61.7 bits (143), Expect = 2e-10
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 75 GVTVETISP--GDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKIGKSEVIRG 248
G+ ++ I D+ ++G + Y L + DSS R PF F++ EVI G
Sbjct: 146 GIQIDQIHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDG 205
Query: 249 WDEGVAKMSVGERAKLTCTPDYAYGQQGHPGVIPPNSTLIFDVELLRL 392
D + M GER ++ +Y YG QG P IP + L F++ L +L
Sbjct: 206 MDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 78 VTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGK-PFKFKIGKSEVIRGWD 254
+T+ + E +G VV Y LT+ K + + GK P+ F +G+++VI G D
Sbjct: 34 ITITSSIDESECEIKSAGGDVVDQYY-KLTDEKGVEIGSNFGKKPYTFTLGRNQVIPGMD 92
Query: 255 EGVAKMSVGERAKLTCTPDYAYGQ 326
+ M +GE K+ P + +
Sbjct: 93 RAMRGMCIGEIRKVVIPPKLGFAK 116
>Z81561-3|CAB04553.2| 350|Caenorhabditis elegans Hypothetical
protein Y63D3A.8 protein.
Length = 350
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 298 PALRIMHTVNRVILVSFRLILHSYLMWNYFVLNKI 402
P+ RI+ +N V L +FRL + +YL+ YFV+ I
Sbjct: 229 PSFRIIALLNMVTLFAFRLCVSAYLV--YFVVVSI 261
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 385 SNSTSNMSVELGGMTPG*PC*PYA*SGVQVSLALSPTDIFATPSSQPLMTSDLP 224
S STS+ V G T P P A + +L +IF +P +QP SD+P
Sbjct: 35 STSTSSQVVPTSGATQQPPF-PSAQAAASTALQNDLEEIFNSPPTQPQTFSDVP 87
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 385 SNSTSNMSVELGGMTPG*PC*PYA*SGVQVSLALSPTDIFATPSSQPLMTSDLP 224
S STS+ V G T P P A + +L +IF +P +QP SD+P
Sbjct: 35 STSTSSQVVPTSGATQQPPF-PSAQAAASTALQNDLEEIFNSPPTQPQTFSDVP 87
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 385 SNSTSNMSVELGGMTPG*PC*PYA*SGVQVSLALSPTDIFATPSSQPLMTSDLP 224
S STS+ V G T P P A + +L +IF +P +QP SD+P
Sbjct: 43 STSTSSQVVPTSGATQQPPF-PSAQAAASTALQNDLEEIFNSPPTQPQTFSDVP 95
>AL032652-11|CAA21712.2| 350|Caenorhabditis elegans Hypothetical
protein Y63D3A.8 protein.
Length = 350
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 298 PALRIMHTVNRVILVSFRLILHSYLMWNYFVLNKI 402
P+ RI+ +N V L +FRL + +YL+ YFV+ I
Sbjct: 229 PSFRIIALLNMVTLFAFRLCVSAYLV--YFVVVSI 261
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 295 SLALSPTDIFATPSSQPLMTSDLPILNLNGLPRSRDE 185
S ++ T +F TPS PLM + L ++ +P ++D+
Sbjct: 168 SASIGSTSVFCTPSRNPLMRNGLR-MSTRSVPENQDD 203
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 108 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKI 224
EST + VHY T+G K D S G+P KF++
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 108 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKI 224
EST + VHY T+G K D S G+P KF++
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 108 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKI 224
EST + VHY T+G K D S G+P KF++
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 108 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKI 224
EST + VHY T+G K D S G+P KF++
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 108 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKI 224
EST + VHY T+G K D S G+P KF++
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 108 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFKI 224
EST + VHY T+G K D S G+P KF++
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical
protein K06G5.1b protein.
Length = 489
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +3
Query: 159 TLTNGKKFDSSRDRGKPFKFKIGKSEVIRGWDEGVAKMSVGERAKLTCTPDYAYGQQGHP 338
TL NGK D+S K F + S + + + V +P+ YG G
Sbjct: 88 TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144
Query: 339 GVIPPNS 359
G++PP++
Sbjct: 145 GLLPPST 151
>Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical
protein K06G5.1a protein.
Length = 507
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +3
Query: 159 TLTNGKKFDSSRDRGKPFKFKIGKSEVIRGWDEGVAKMSVGERAKLTCTPDYAYGQQGHP 338
TL NGK D+S K F + S + + + V +P+ YG G
Sbjct: 88 TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144
Query: 339 GVIPPNS 359
G++PP++
Sbjct: 145 GLLPPST 151
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 181 LIHRVTVVNHSSSRL-ASLKSLEAGMRVLQK 270
L+HRV+++ H SS+ AS++ E ++V +K
Sbjct: 279 LMHRVSLLEHKSSQYGASVRRHEGHLKVFEK 309
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 181 LIHRVTVVNHSSSRL-ASLKSLEAGMRVLQK 270
L+HRV+++ H SS+ AS++ E ++V +K
Sbjct: 279 LMHRVSLLEHKSSQYGASVRRHEGHLKVFEK 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,648,169
Number of Sequences: 27780
Number of extensions: 189391
Number of successful extensions: 484
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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