Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P22
(401 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0202 - 1638978-1639571 63 9e-11
02_01_0158 - 1103461-1104186 60 5e-10
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 30 0.79
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 29 1.0
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193... 28 2.4
07_03_0592 + 19805647-19805817,19805960-19806332,19807347-19807474 28 2.4
01_05_0718 - 24575946-24576121,24576721-24576874,24576964-245770... 28 2.4
11_01_0018 + 133791-134081 27 4.2
04_01_0208 + 2596110-2596928 27 4.2
02_01_0322 + 2192257-2192310,2192452-2192730,2192768-2192921,219... 27 4.2
09_02_0515 + 10121849-10122149,10132151-10132187,10132314-101327... 27 5.6
03_02_0507 - 8999902-9000649,9001106-9001225,9001314-9001394,900... 27 5.6
03_02_0102 + 5637469-5639064 27 5.6
01_06_0247 + 27851206-27851255,27851382-27851496,27852280-278524... 27 5.6
12_02_1029 - 25521641-25521852,25521978-25522035,25522142-255221... 27 7.3
11_06_0034 - 19448316-19449767 27 7.3
09_02_0161 + 5121977-5122318,5123883-5124007,5124815-5125112 27 7.3
08_01_0338 + 3000897-3002447 27 7.3
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 27 7.3
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 26 9.7
06_03_0404 - 20460555-20462135 26 9.7
01_06_0990 - 33623085-33623615,33624138-33624278 26 9.7
01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,619... 26 9.7
>08_01_0202 - 1638978-1639571
Length = 197
Score = 62.9 bits (146), Expect = 9e-11
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +2
Query: 89 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVA 268
+E+V GTVKWF+ G+GFI +D ED+FVHQ+++ RS+ DG+ VEF+V +
Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSL----KSDGYRSLNDGDVVEFSVGS 58
Query: 269 GEKG 280
G G
Sbjct: 59 GNDG 62
>02_01_0158 - 1103461-1104186
Length = 241
Score = 60.5 bits (140), Expect = 5e-10
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = +2
Query: 89 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVA 268
A + GTVKWFN G+GFI+ +D ED+FVHQ++I RS+ +GE VEFA+
Sbjct: 4 AARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSI----KADGFRSLAEGEQVEFAISE 59
Query: 269 GEKG 280
E G
Sbjct: 60 SEDG 63
>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 29.9 bits (64), Expect = 0.79
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 209 GCFGLSQFDVQTHLLWCHS 153
GC+GL QF ++ LL CHS
Sbjct: 1107 GCYGLPQFRMRVFLLGCHS 1125
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 110 VKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGYEA 289
V W+ G + ++ A + NPR+A + D + E AVV G YE+
Sbjct: 439 VFWWGDDEGESSAAARRWLDALYAAMEAAVSGNPREAFVNYRDLDIGENAVVGGVTEYES 498
Query: 290 ARV-TWSR 310
AR WS+
Sbjct: 499 ARSGQWSQ 506
>10_08_0021 +
14217455-14217505,14217742-14217909,14219137-14219340,
14219429-14219601,14219970-14220066,14220183-14220336,
14222029-14222209,14222858-14222898,14223146-14223231,
14223282-14223389,14223538-14223579
Length = 434
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 220 SLARVVSDYRSLMYKHIFFGVIPIDETISTL 128
SL R+ DY L Y+H +PI+ET+ L
Sbjct: 115 SLERLAVDYIDLYYQHRIDQSVPIEETMGEL 145
>07_03_0592 + 19805647-19805817,19805960-19806332,19807347-19807474
Length = 223
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 188 TAIIRNNPRKAVRSVGDGEAVEFAVVAG 271
TAI+ N AV +VGD AV F V AG
Sbjct: 68 TAILINGETLAVANVGDSRAVAFDVRAG 95
>01_05_0718 -
24575946-24576121,24576721-24576874,24576964-24577060,
24577142-24577314,24577426-24577629,24577725-24577892,
24577938-24578084
Length = 372
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 220 SLARVVSDYRSLMYKHIFFGVIPIDETISTL 128
SL R+ DY L Y+H IPI++TI L
Sbjct: 147 SLGRLGVDYIDLYYQHRVDTTIPIEDTIGEL 177
>11_01_0018 + 133791-134081
Length = 96
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 240 ERRWSLPWLPGRKAMKQPELLGPGGESVKGSPYAADKRRSYHRQYYPRQSGGRG 401
ERRW WL +A K+ G GE K +R + + P SGG G
Sbjct: 16 ERRWGWIWLVAEEAGKEAARRG-RGEGGKRKTRRWSRRVAEESRTTPSASGGGG 68
>04_01_0208 + 2596110-2596928
Length = 272
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 243 RRWSLPWLPGRKAMKQPELLGPGGESVKGSPYAADKRRSYHRQYYPRQSGGR 398
R W+ W P R+A + E++ PG + S +RR H + R SGGR
Sbjct: 43 RYWTPTWRPLRRASSEEEVM-PGMRAASRSRGRWWRRRPAHGK---RDSGGR 90
>02_01_0322 +
2192257-2192310,2192452-2192730,2192768-2192921,
2193010-2193602
Length = 359
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 288 QPELLGPGGESVKGSPYAADKRRSYHRQYYPRQSGGRG 401
+PE G GG+ A D + H+ P+ S G G
Sbjct: 50 RPEATGDGGDRAVEDKQAPDSGKEGHKNQQPQNSDGDG 87
>09_02_0515 +
10121849-10122149,10132151-10132187,10132314-10132790,
10133184-10133733
Length = 454
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 98 VSGTVKWFNVKSGYGFINRNDTKE 169
V+ VKW +KSG F N KE
Sbjct: 195 VAAAVKWLKIKSGQAFAVENYVKE 218
>03_02_0507 -
8999902-9000649,9001106-9001225,9001314-9001394,
9001591-9001613
Length = 323
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 270 GRKAMKQPELLGPGGESVKGSPYAADKRRSYHRQYYPRQSGG 395
G + K P + ES GSP+ DKR+++ S G
Sbjct: 143 GMASKKYPAKIDDDSESEDGSPFRKDKRKAHGNNNIDSGSSG 184
>03_02_0102 + 5637469-5639064
Length = 531
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 252 SLPWLPGRKAMKQPELLGPGGESVKGSPYAAD 347
S P P R+ PE+ G GGE V S AD
Sbjct: 14 SKPRRPAREPAPAPEVCGGGGEEVVASDADAD 45
>01_06_0247 +
27851206-27851255,27851382-27851496,27852280-27852468,
27853698-27854057,27854138-27854201,27854365-27854504,
27854610-27854918,27855135-27855389
Length = 493
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 200 RNNPRKAVRSVGDGEAVEFAVVAGEKGYEAAR 295
+N+P K S+GD +AVE + G+ +AR
Sbjct: 17 KNSPTKGSLSLGDLDAVEVLPASATAGWSSAR 48
>12_02_1029 -
25521641-25521852,25521978-25522035,25522142-25522191,
25522280-25522585,25522666-25523068,25524573-25524624,
25525523-25525572,25526151-25526306,25526987-25527286
Length = 528
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = -2
Query: 307 GPSNSGCFIAFLPG-----NHGKLHRLSVAYRTHSLARVVSDYRSLMYKHIFFGVIPIDE 143
GP N G ++ P + K H L Y S R++SD + ++ + FG
Sbjct: 130 GPLNGGGSLSDSPPVSPDVDDSKAHMLQKYYTPKSHCRIISDQQEEVFDLMVFGGCLFCR 189
Query: 142 TISTLDVEPF 113
+ST +P+
Sbjct: 190 AVSTPKPQPY 199
>11_06_0034 - 19448316-19449767
Length = 483
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +2
Query: 197 IRNNPRKAVRSVGDGEAVEFAVVAGEKG----YEAARVTWSR 310
+R P A R+ D V +AV G +G ++A R W R
Sbjct: 95 VRGGPGAAGRTFYDDSRVSYAVEVGRRGGITGWDARRAAWMR 136
>09_02_0161 + 5121977-5122318,5123883-5124007,5124815-5125112
Length = 254
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 83 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPR 214
+++E+V GTVKWF+ + E+ V T ++R R
Sbjct: 1 MVSERVKGTVKWFDATAAME-ATAATAGEEAAVCATCVVRRATR 43
>08_01_0338 + 3000897-3002447
Length = 516
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 358 LRRLSAA*GEPLTDSPPGPSNSGCFIAFLPGNHGKLHRLSVAY 230
LRR++A G T +P GPS F+A H L + A+
Sbjct: 67 LRRIAAEHGPVFTFAPLGPSRPTIFVAARGAAHRALVQRGAAF 109
>07_03_1555 - 27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 393 PHFDVGSIDDGSCGVCQLHKVNP 325
PH D+ SI+D + + LH++NP
Sbjct: 1103 PHHDIYSIEDLAQLIYDLHQINP 1125
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 237 TERRWSLPWLPGRKAMKQPELLGPGGE 317
T+R WSL W P A P L GG+
Sbjct: 21 TDRVWSLAWNPSPGAGAGPVLASCGGD 47
>06_03_0404 - 20460555-20462135
Length = 526
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 158 DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGYEAARVTWSRR 313
D ++V + +NPR A + D + E AV G YE RV W +
Sbjct: 440 DWIKNVHAFMEPFVTSNPRDAYVNYRDLDIGENAVAGGVTSYENGRV-WGEK 490
>01_06_0990 - 33623085-33623615,33624138-33624278
Length = 223
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 393 PHFDVGSIDDGSCGVCQLHKV 331
P + V + ++ SCG QLH+V
Sbjct: 28 PEYQVSTTEENSCGGSQLHQV 48
>01_01_0009 +
57658-60086,60855-60935,61094-61295,61385-61905,
61996-62114,62248-62345
Length = 1149
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 277 FLPGNHGKLHRLSVAYRTHSLARVVSDYRSLMYKHIFFGVIPIDETISTL 128
FL H ++ R H+ A SD SL + GVIP T++T+
Sbjct: 97 FLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTV 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,470,177
Number of Sequences: 37544
Number of extensions: 179691
Number of successful extensions: 592
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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