Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P21
(291 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 77 1e-14
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 77 1e-14
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 77 1e-14
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 77 1e-14
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 77 1e-14
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 77 1e-14
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 75 6e-14
BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein. 40 0.001
AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6 pr... 40 0.001
BC032656-1|AAH32656.1| 455|Homo sapiens TCF7L2 protein protein. 27 8.3
AJ270770-6|CAB97217.1| 482|Homo sapiens T-cell transcription fa... 27 8.3
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE LR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERTLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 43 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 81
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 15 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 64
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 14 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 52
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 74.5 bits (175), Expect = 6e-14
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC 289
W G+V+R++GGNDK GFPMKQGVLT+ RVRLL+SKGHSC
Sbjct: 45 WKGYVVRISGGNDKXGFPMKQGVLTHGRVRLLLSKGHSC 83
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHELERSXXXXXXXXXQAGLPYETG 237
+V DE KLR FYEKRM EV AD LG E + + G P + G
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKXGFPMKQG 66
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein.
Length = 99
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 5/36 (13%)
Frame = +2
Query: 173 WNGHVLRVAGGNDKQGFPM-----KQGVLTNSRVRL 265
W G+V+R++GGN+KQGF KQG+LT+ RL
Sbjct: 45 WKGYVVRISGGNNKQGFLFVGGNNKQGILTHGHARL 80
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHE 171
KV DE KLR FYEK M E+ A LG E
Sbjct: 17 KVEDERKLRTFYEKHMATEIAAYALGEE 44
>AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6
protein.
Length = 91
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +1
Query: 88 KVVDEHKLRIFYEKRMGAEVDADLLGHE 171
+V DE KLR FYEKRM EV AD LG E
Sbjct: 17 EVDDERKLRTFYEKRMATEVAADALGEE 44
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 33 MKLNVSYPATGC 68
MKLN+S+PATGC
Sbjct: 1 MKLNISFPATGC 12
>BC032656-1|AAH32656.1| 455|Homo sapiens TCF7L2 protein protein.
Length = 455
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 234 CFIGKPCLSLPPATRRT*PFQFVA*KICINFSAHTLFIE 118
CF+ PCLSLPP T F K+ SAH L +E
Sbjct: 417 CFLN-PCLSLPPITGEK-KSAFATYKVKAAASAHPLQME 453
>AJ270770-6|CAB97217.1| 482|Homo sapiens T-cell transcription
factor-4 medium C-terminal isoform 2 protein.
Length = 482
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 234 CFIGKPCLSLPPATRRT*PFQFVA*KICINFSAHTLFIE 118
CF+ PCLSLPP T F K+ SAH L +E
Sbjct: 444 CFLN-PCLSLPPITGEK-KSAFATYKVKAAASAHPLQME 480
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,876,491
Number of Sequences: 237096
Number of extensions: 700098
Number of successful extensions: 1152
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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