Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P20
(418 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 33 0.083
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 33 0.083
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 32 0.15
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 32 0.19
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 31 0.34
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 30 0.59
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 0.78
AF125460-1|AAD12847.3| 456|Caenorhabditis elegans Hypothetical ... 30 0.78
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 1.0
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 1.0
AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical ... 29 1.0
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 1.0
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 29 1.4
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 28 3.1
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 28 3.1
AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical... 27 4.1
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 27 4.1
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 27 5.5
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 5.5
U80441-3|AAB37653.2| 262|Caenorhabditis elegans Hypothetical pr... 27 5.5
U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 lik... 27 5.5
AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical... 27 5.5
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 5.5
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ... 27 5.5
AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q ... 27 5.5
Z70036-2|CAE17914.1| 155|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 27 7.2
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 27 7.2
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 27 7.2
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 26 9.5
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 26 9.5
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 26 9.5
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 26 9.5
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 26 9.5
AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical ... 26 9.5
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 26 9.5
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical protein
F56C9.10b protein.
Length = 1031
Score = 33.1 bits (72), Expect = 0.083
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 275
+ ST + G G + G K +KK+ PPA+AP S KSS ++
Sbjct: 960 ESSTPFARNGSGSSSSTGATGG-KSLKKKKTPPASAPLPTSSTKSSQKDK 1008
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical protein
F56C9.10a protein.
Length = 1028
Score = 33.1 bits (72), Expect = 0.083
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 275
+ ST + G G + G K +KK+ PPA+AP S KSS ++
Sbjct: 957 ESSTPFARNGSGSSSSTGATGG-KSLKKKKTPPASAPLPTSSTKSSQKDK 1005
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 105 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPK----TKESAKSSDDE 272
E K S S +K+ +A+ ++ E EVKK + P PK +ES +SS DE
Sbjct: 314 EEEKSSKKRSKKSKKESDEEQQASDSEEEVVEVKKNSKSPKKTPKKTAVKEESEESSGDE 373
Query: 273 QAPV 284
+ V
Sbjct: 374 EEEV 377
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 31.9 bits (69), Expect = 0.19
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 275
+ +A K+GRGRP++ T S T++ + AA ++K + ++EQ
Sbjct: 565 EAPSAPVKRGRGRPRSRSTMSITED-SEPSTSSTAAKRSKRAESDEEEEQ 613
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 141 VEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESA--KSSDDE 272
++ K RG+ K + +TK +K+ P APK E+ +S+DDE
Sbjct: 308 IQAKNRGKSKDKLKEEKTKSLKEEKDIPGPAPKPLETVFYESTDDE 353
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 30.3 bits (65), Expect = 0.59
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Frame = +3
Query: 147 KKGRGRPKANGTQSETK--------EVKKRGRPPAAAPKTKESA 254
K+GRGRP+ ++ + + E KKRGRP AA ++E A
Sbjct: 95 KRGRGRPRKQSSEEKVQIPKVVVKFEPKKRGRPAGAAKWSQEVA 138
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +3
Query: 66 VTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTK 245
+T +C E NK DD G+ +GT S T K+ AP++
Sbjct: 799 LTMLSSKCASKFDEKNKKDDDDEANGGTTGKRGNSGSGTTSLTVTGKQSNNQSGIAPQSN 858
Query: 246 ESAKSSDDEQAPV 284
E + +D P+
Sbjct: 859 EKRSTLNDSVLPL 871
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +3
Query: 66 VTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTK 245
+T +C E NK DD G+ +GT S T K+ AP++
Sbjct: 799 LTMLSSKCASKFDEKNKKDDDDEANGGTTGKRGNSGSGTTSLTVTGKQSNNQSGIAPQSN 858
Query: 246 ESAKSSDDEQAPV 284
E + +D P+
Sbjct: 859 EKRSTLNDSVLPL 871
>AF125460-1|AAD12847.3| 456|Caenorhabditis elegans Hypothetical
protein Y9D1A.1 protein.
Length = 456
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 108 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKT 242
+NK ++GS ++ GR P+ +G + + RG P + KT
Sbjct: 242 YNKDDEEGSGRKDRAGRVGPEGSGRKDRDETTMVRGSPETSTIKT 286
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 108 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRP 221
+NK ++GS ++ GR P+ +G + + RG P
Sbjct: 77 YNKDDEEGSGRKDRAGRIGPEGSGRKDRNETTMVRGSP 114
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
D + ++K+ +N S+ V PPAA K KES + + +E V
Sbjct: 640 DSNDKIDKEPNASSTSNDETSKDDTVPMESDPPAATEKPKESTEITTEEPLEV 692
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 117 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
++D GS+ V KKGRGRP N + + K+GR A ++ + D +PV
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADT-DAIDTASSPV 164
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGR 218
D +++ KKGRGRP N + + K+GR
Sbjct: 158 DTASSPVKKGRGRPAKNPSADAGSPLVKKGR 188
>AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical
protein F54A5.2 protein.
Length = 360
Score = 29.5 bits (63), Expect = 1.0
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +3
Query: 21 LILLPPAINSLWPITVTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPK---ANGT-QS 188
+++LPP I S+ + + C++ F L D+ + G PK ANGT QS
Sbjct: 11 VVVLPPLIRSVAIVDTSIACDKTDFLL---KIKFDENFRGTIQSRAGHPKCIYANGTLQS 67
Query: 189 ETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
+TK K P TKE+ + + + + V
Sbjct: 68 DTKYQLK---IPLTGCSTKENGEGNLENEIEV 96
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 117 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
++D GS+ V KKGRGRP N + + K+GR A ++ + D +PV
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADT-DAIDTASSPV 164
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGR 218
D +++ KKGRGRP N + + K+GR
Sbjct: 158 DTASSPVKKGRGRPAKNPSADAGSPLVKKGR 188
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 147 KKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 281
KK ++ ++ K+ + P A K + S+ SSDDE+ P
Sbjct: 278 KKADSSSDSSDDEAPAKKTPAKAAPKPVAKKAESSSDSSDDEKKP 322
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 195 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
K + P A K + S+ SSDDE+ PV
Sbjct: 325 KPTPAKATPKPVAKKAESSSDSSDDEKKPV 354
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 195 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
K + P A K + S+ SSDDE+ PV
Sbjct: 387 KPTPAKATPKPVAKKAESSSDSSDDEKKPV 416
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 147 KKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 275
KK ++ ++ K+ + P A+ K + S+ SSDDE+
Sbjct: 431 KKADSSSDSSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEK 473
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 195 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
K P A K + S+ SSDDE+ PV
Sbjct: 509 KPTPANATPKPVAKKAESSSDSSDDEKKPV 538
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 269
D S E++ +G A Q + +E K R + PAA P ++E+ + DD
Sbjct: 230 DESKGEEEEDQGVRPAQKRQVKQQE-KPRKQKPAAPPSSEENEEDEDD 276
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 126 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 269
D S E++ +G A Q + +E K R + PAA P ++E+ + DD
Sbjct: 230 DESKGEEEEDQGVRPAQKRQVKQQE-KPRKQKPAAPPSSEENEEDEDD 276
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 78 CERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPP 224
CE C A + + + S A+E+K R + ET +VK+R PP
Sbjct: 82 CEDCIIAQLDGHLQAK--SAAIEEKKRATAAMLDCELETPKVKERPTPP 128
>AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical
protein F33D4.6a protein.
Length = 396
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 LKEVEVD-LKDLRKSLPRARVHQLKEE 363
++EVE + +K RKSLPR ++H L+++
Sbjct: 317 IEEVEQETIKPKRKSLPRRKIHYLEKK 343
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 LKEVEVD-LKDLRKSLPRARVHQLKEE 363
++EVE + +K RKSLPR ++H L+++
Sbjct: 317 IEEVEQETIKPKRKSLPRRKIHYLEKK 343
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 174 NGTQSETKEVKKRGRPPAAAPKTKESAKSSD 266
+GT+ + K VK + +PP PK E+ +SD
Sbjct: 1449 SGTKKQEKVVKNKKKPP--TPKANENTTTSD 1477
>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical protein
ZC247.1 protein.
Length = 4404
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 271 NRHL*LKEVEVDLKDLRKSLPRARVHQLKEEAVVGSARMQQHPRK 405
NRH L +E + R+S RAR+ ++ E +VG + R+
Sbjct: 4344 NRHEELPMIEDGAMECRRSTVRARLREMDEVRLVGEREEIERQRR 4388
>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical protein
ZC247.1 protein.
Length = 4404
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 271 NRHL*LKEVEVDLKDLRKSLPRARVHQLKEEAVVGSARMQQHPRK 405
NRH L +E + R+S RAR+ ++ E +VG + R+
Sbjct: 4344 NRHEELPMIEDGAMECRRSTVRARLREMDEVRLVGEREEIERQRR 4388
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 174 NGTQSETKEVKKRGRPPAAAPKTKESAKSSD 266
+GT+ + K VK + +PP PK E+ +SD
Sbjct: 1449 SGTKKQEKVVKNKKKPP--TPKANENTTTSD 1477
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 105 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKS 260
++ KMS V+K+ + + + E +++KK P AAPKT + KS
Sbjct: 1286 KYEKMSQPKKERVKKEPKEPKEPKKVKKEGQDIKKFMSP--AAPKTAKKEKS 1335
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 105 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKS 260
++ KMS V+K+ + + + E +++KK P AAPKT + KS
Sbjct: 1286 KYEKMSQPKKERVKKEPKEPKEPKKVKKEGQDIKKFMSP--AAPKTAKKEKS 1335
>U80441-3|AAB37653.2| 262|Caenorhabditis elegans Hypothetical
protein F27C1.3 protein.
Length = 262
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 123 DDGSTAVEKKGRGRPKANGTQSETKEV--KKRGRPPAAAPKTKESAKSSDDEQAP 281
DD ++K R + K + ++ K+ K++G+ PA APK ++ + D P
Sbjct: 58 DDDDDEDDEKRRKKKKNDAIAAKKKKAAAKEKGKIPAGAPKPPKNRAAIADTHDP 112
>U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 like
protein 7, isoformc protein.
Length = 60
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 138 AVEK-KGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 281
AV+K K + K + + +VKK AAAPK K+ K + +++P
Sbjct: 3 AVQKAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAAKKSP 51
>AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical
protein Y56A3A.7b protein.
Length = 570
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 195 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
+E +K PPAAAP E + +DE++ +
Sbjct: 448 EEDEKLKLPPAAAPSLNEDSVDDEDEESDI 477
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 174 NGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 272
N + E++EVKK G+ KTKE + + +E
Sbjct: 711 NKYKKESEEVKKTGKNKDKVEKTKEEVEKAKEE 743
>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 271 NRHL*LKEVEVDLKDLRKSLPRARVHQLKEEAVVGSARMQQHPRK 405
NRH L +E + R+S RAR+ ++ E +VG + R+
Sbjct: 4344 NRHEELPMIEDGAMECRRSTVRARLREMDEVRLVGEREEIERQRR 4388
>AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q
protein.
Length = 60
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 138 AVEK-KGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 281
AV+K K + K + + +VKK AAAPK K+ K + +++P
Sbjct: 3 AVQKAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAAKKSP 51
>Z70036-2|CAE17914.1| 155|Caenorhabditis elegans Hypothetical
protein T01B4.3 protein.
Length = 155
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 111 NKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 272
+K D G AV + + K NG ETK+ +R + + ++ +SSDDE
Sbjct: 102 SKEKDPGLAAVVEDEKSAKK-NGRFKETKQKMERFKKLRRSKDRQQLIESSDDE 154
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 120 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 263
S + ST EK +A T SET E + K ++ KSS
Sbjct: 184 STEASTEEEKSTEASEEATTTSSETSETTEESEEEETTTKPAKTHKSS 231
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +3
Query: 129 GSTAVEKKGRGRPKANGTQSETKEV------KKRGRPPAAAPKTKESAKSSDDEQAP 281
GS+++E K G+ K N SE+ + K+R R + + + S SDDE P
Sbjct: 621 GSSSLESKN-GKKKKNFNMSESSDDETSNSRKRRKRESSESQSSSSSDDDSDDEDRP 676
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +3
Query: 129 GSTAVEKKGRGRPKANGTQSETKEV------KKRGRPPAAAPKTKESAKSSDDEQAP 281
GS+++E K G+ K N SE+ + K+R R + + + S SDDE P
Sbjct: 621 GSSSLESKN-GKKKKNFNMSESSDDETSNSRKRRKRESSESQSSSSSDDDSDDEDRP 676
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/56 (23%), Positives = 23/56 (41%)
Frame = +3
Query: 114 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 281
+M T++ GR NG Q+ + + PP A P ++ ++ Q P
Sbjct: 555 QMPAASGTSISVPVNGRHNVNGKQASIESLSDPPPPPYAPPSPPRASSAAAAHQQP 610
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 138 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 259 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 307
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 138 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 259 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 307
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 138 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 259 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 307
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 138 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 284
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 258 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 306
>AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical
protein B0348.5 protein.
Length = 254
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 123 DDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 263
DD + A +K G P T+ K K + AAAP + + ++
Sbjct: 194 DDAAKANKKTTTGSPSTTSTRKPRKARKPTKKTVAAAPSSSSNTSTT 240
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 150 KGRGRPK--ANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 272
KG G PK + G + + +++K + + PKT++ + +DD+
Sbjct: 177 KGTGAPKWISFGKRGQKGQLEKGFKANSVMPKTQKEGEDADDD 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,754,969
Number of Sequences: 27780
Number of extensions: 126263
Number of successful extensions: 756
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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