Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P19
(480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 233 5e-62
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 231 3e-61
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 225 1e-59
02_01_0759 - 5628913-5630870,5631023-5631047 31 0.49
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 1.1
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 29 1.5
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 29 2.0
06_01_0499 - 3581145-3582425 29 2.6
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735... 28 3.4
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 3.4
09_06_0088 + 20774901-20775491,20776172-20776687 28 4.5
03_03_0149 + 14843880-14844145,14846501-14846561,14846608-148467... 28 4.5
09_06_0319 - 22293869-22293906,22294539-22295808 27 6.0
09_02_0020 + 3042502-3042980,3043068-3043176,3043290-3043476,304... 27 6.0
08_02_0567 + 18769742-18769790,18769928-18771351 27 6.0
06_02_0084 - 11547820-11548773 27 6.0
01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411 27 6.0
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756... 27 7.9
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 233 bits (570), Expect = 5e-62
Identities = 108/155 (69%), Positives = 124/155 (80%)
Frame = +1
Query: 10 DDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKML 189
D+FP CVHLVS E E +SSEALEA RI CNKY+ KN GKD FH+R+R+HPFHV+RINKML
Sbjct: 44 DEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKML 103
Query: 190 SCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 369
SCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR + EALRRAKFKFPGRQ
Sbjct: 104 SCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQ 163
Query: 370 KIYVSKKWGFTKYEREEFEKLRDAGRFANDGCNVK 474
KI S+KWGFTK+ REE+ KL+ GR +DG N +
Sbjct: 164 KIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQ 198
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 231 bits (564), Expect = 3e-61
Identities = 106/155 (68%), Positives = 123/155 (79%)
Frame = +1
Query: 10 DDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKML 189
DDFPLCVHLVS E E +SSEALEA RI CNKY+ K+ GKD FH+R+ HP+HV+RINKML
Sbjct: 351 DDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKML 410
Query: 190 SCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 369
SCAGADRLQTGMRGAFGKP GT ARVRIGQ ++SVR D A EALRRAKFKFPGRQ
Sbjct: 411 SCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQ 470
Query: 370 KIYVSKKWGFTKYEREEFEKLRDAGRFANDGCNVK 474
++ S KWGFT+++R+E+ KL+ GR DG N K
Sbjct: 471 RVIFSAKWGFTRFKRDEYLKLKSEGRIVPDGVNAK 505
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 225 bits (551), Expect = 1e-59
Identities = 104/155 (67%), Positives = 121/155 (78%)
Frame = +1
Query: 10 DDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKML 189
D+F CVHLVS E E ++SEALEA RI CNKY+ K+ GKD FH+R+R+HPFHV+RINKML
Sbjct: 40 DEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKML 99
Query: 190 SCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 369
SCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR EALRRAKFKFPGRQ
Sbjct: 100 SCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQ 159
Query: 370 KIYVSKKWGFTKYEREEFEKLRDAGRFANDGCNVK 474
KI S+KWGFTK+ R+E+ +L+ GR DG N K
Sbjct: 160 KIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAK 194
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -2
Query: 305 SLERTDIMGCPIRT---RATVPWGFPNAPRIPVWSLSAPAHDNILLMRMTWKGCSLIRMW 135
SLER DI CP+ T A V G PN + V S S +D +R + CS I+
Sbjct: 233 SLERLDITRCPLITDKGLAAVAHGCPNLLSLTVESCSGVGNDG---LRAIGRSCSKIQAL 289
Query: 134 N 132
N
Sbjct: 290 N 290
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.9 bits (64), Expect = 1.1
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -2
Query: 284 MGCPIRTRATVPWGFPNAPRIPVWSLSAPAH 192
+ CP+ + + VP P++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 19 PLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 123
P C +HL SD Y S E ++AG+ C L K G
Sbjct: 592 PRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 109 RGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPL 5
R CC GL P P S+ R+ +L A S P+
Sbjct: 179 RSRCCRHRGLSPPPSRSSPRSPSSLPAAPAASLPV 213
>06_01_0499 - 3581145-3582425
Length = 426
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 439 HHVASQIPHVRTW*SPTS*IHRSSGDQG 356
H A+++ HVR W SPTS + D G
Sbjct: 116 HGAAAELAHVRAWWSPTSHAAAADWDDG 143
>10_08_0789 +
20569738-20570207,20573425-20573464,20573484-20573536,
20573633-20574212,20574323-20575384,20575631-20575813,
20576112-20576199,20576285-20576532,20576712-20577053,
20579026-20579163,20579521-20579547
Length = 1076
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 4 RGDDFPLCVHLVSDEYEQLSSEALEAGRICCNKY 105
RGD F LC L D + + EA+ A C N Y
Sbjct: 289 RGDIFLLCTELPRDSSQLCNDEAVLAMATCSNLY 322
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 238 GKPQGTVARVRIGQPIMSVRSSD 306
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>09_06_0088 + 20774901-20775491,20776172-20776687
Length = 368
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 347 LARRRASMT---CAFQRSLERTDIMGCPIRTRATVPWGFPNAPRIPVWSLSAPAHDNILL 177
L R +S+T C+ ++ T+++GCP+R V G P + R + P D +
Sbjct: 207 LELRESSITPIHCSDEQLAAVTEVLGCPVRLLPIVYLGLPLSVRKLGKADLQPMMDRLAK 266
Query: 176 MRMTWK 159
+WK
Sbjct: 267 SLASWK 272
>03_03_0149 +
14843880-14844145,14846501-14846561,14846608-14846720,
14848448-14848540,14849578-14849793,14853773-14856023
Length = 999
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 199 QRTTTFY*CG*HGRGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQ 65
+ TTT CG HGR ++SS L+++++ G+ +Y + PQ
Sbjct: 134 RETTTTSSCGEHGRILLSSP-SPSLFKANVLGSLAYKYITMGIPQ 177
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 238 GKPQGTVARVRIGQPIMSVRSSD 306
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>09_02_0020 +
3042502-3042980,3043068-3043176,3043290-3043476,
3043690-3043784
Length = 289
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 265 VRIGQPIMSVRSSDR---WKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYEREEFEKLR 435
+R+G P S +R W + E R K GR+ ++WG ++ ++ R
Sbjct: 111 MRVGPPKQSDAGEERRGAWSRRSSEMWERRGEKRRGRKGSMRIQRWGQKRFSKKNINLHR 170
Query: 436 DAGRF 450
+A RF
Sbjct: 171 EAYRF 175
>08_02_0567 + 18769742-18769790,18769928-18771351
Length = 490
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +1
Query: 223 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQKI 375
MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR ++
Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHRL 76
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 187 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 315
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
>01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411
Length = 465
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 190 SCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGR- 366
S G DR + G+P+ + VR P++ +++ W A + + + PG
Sbjct: 251 SSYGYDRSPKIVEMDTGRPKSRSSSVRTSPPVVDAGAAEEWYANSVSSPLLPFHQLPGAP 310
Query: 367 QKIYVSKKWGFTKYEREEFEKLRDA 441
+I F +Y+ EK R A
Sbjct: 311 PRISAPSARHFPEYDWCPLEKPRPA 335
>07_03_0770 -
21375099-21375122,21375321-21375448,21375541-21375672,
21377016-21377874
Length = 380
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 145 SGCGTDLYRSSLRGTCCNR 89
+GCGT++ R ++ G CNR
Sbjct: 97 AGCGTNVSRDAVAGPTCNR 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,636,386
Number of Sequences: 37544
Number of extensions: 300564
Number of successful extensions: 849
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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