Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P15
(306 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 37 0.004
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 36 0.005
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 36 0.005
07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 33 0.033
07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588 33 0.058
07_03_1635 + 28286133-28286831 32 0.077
01_04_0020 + 15142402-15143421 32 0.077
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 30 0.31
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 29 0.55
07_03_1636 + 28290642-28291574 29 0.95
03_06_0619 - 35136435-35136728,35137155-35137358,35137476-351376... 27 2.2
07_03_0505 + 18858406-18858522,18859860-18859955,18860760-18861047 27 2.9
04_01_0359 + 4711289-4713052,4713423-4713950 27 2.9
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313... 27 3.8
01_07_0206 + 41990251-41992032,41992131-41992361 27 3.8
11_01_0793 - 6978688-6980234,6982769-6982843,6983383-6983584 26 5.1
06_01_0559 - 3973261-3973778,3974694-3975591 26 5.1
02_02_0300 - 8746526-8747224,8749033-8749089,8749414-8749650,875... 26 5.1
08_01_0984 - 9952630-9954132 26 6.7
06_01_1137 + 9412230-9412378,9412549-9412634,9413417-9413496,941... 26 6.7
11_06_0050 + 19631164-19631987,19632103-19634023 25 8.9
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 25 8.9
01_04_0133 + 16477502-16479475 25 8.9
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 49 PRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISIPPAVLKGETHE 204
P WN+ I +P + + L+++D+ +FT D+ + A I+I P V + +E
Sbjct: 269 PVWNERILLSIPDPIPMLKLQVYDKDTFTTDDRMGEAEINIQPLVAAAKAYE 320
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 16 ETHTDPSGGKTPRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISIPPAV 183
+T PS P WN+V+ +P + LE++D +F+ D+++ A I + P +
Sbjct: 142 QTTVKPSD-LNPVWNEVLKISIPRNYGPLKLEVYDHDTFSADDIMGEAEIDLQPMI 196
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 36.3 bits (80), Expect = 0.005
Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Frame = +1
Query: 16 ETHTDPSGGKTPRWNKVIHCLLP------PGVNS-------VYLEIFDECSFTMDELIAW 156
+T TD +GG P W+ + LP P +S + E+ E + D L A
Sbjct: 476 KTATDRAGGGNPEWDAPLRLYLPSSSSSSPATSSDNKDEVLLRFELKSEVAVLGDVLSAT 535
Query: 157 AHISIPPAVLKGETHEDWYPLNGKQGDGMEGMINLVLSYTVGPAAAVAT 303
A + + V G T Y L G G G+I+ SY V AAA T
Sbjct: 536 AAVPVSELVADGATRRVSYQLAGPDGKHPNGVIS--FSYAVHAAAAADT 582
>07_01_1046 -
9138000-9138293,9139550-9139714,9139862-9140010,
9140363-9140510,9140659-9140727,9140827-9141087,
9141498-9141692,9142932-9143048,9143701-9144477
Length = 724
Score = 33.5 bits (73), Expect = 0.033
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +1
Query: 34 SGGKTPRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISIPPAVLKGETHEDWY 213
+ + P+W++ + + V+ V + D F ELI A + + + G+T W+
Sbjct: 87 ANSENPKWDEHFYVQVAHSVSRVEFHVKDNDVFGA-ELIGVASVPVEN-ITPGDTVSGWF 144
Query: 214 PLNGKQGDGMEGMINLVLSYTVGP 285
P++G+ + M+ L LS P
Sbjct: 145 PISGQYSNPMKASPELHLSIQYKP 168
>07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588
Length = 173
Score = 32.7 bits (71), Expect = 0.058
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 49 PRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISI 171
P WN+V+ + V LE+FDE FT D+ + A ++
Sbjct: 59 PVWNEVLQLAVTNPTKPVKLEVFDEDKFTADDSMGVAEFNV 99
>07_03_1635 + 28286133-28286831
Length = 232
Score = 32.3 bits (70), Expect = 0.077
Identities = 23/94 (24%), Positives = 35/94 (37%)
Frame = +1
Query: 19 THTDPSGGKTPRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISIPPAVLKGET 198
T D GG+ P WN +H +P +L + + + + +P A L+
Sbjct: 43 TLPDRHGGRNPTWNATLHLAVPAAAPGAFLHVLLRTERALGDRDV-GEVFVPVADLQLAA 101
Query: 199 HEDWYPLNGKQGDGMEGMINLVLSYTVGPAAAVA 300
+ L K E L LSY +GP A
Sbjct: 102 AAHYQYLVHKVQSTTEHCGVLSLSYRLGPVVVPA 135
>01_04_0020 + 15142402-15143421
Length = 339
Score = 32.3 bits (70), Expect = 0.077
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 10 IYETHTDPSGGKTPRWNKVIHCLLP 84
++ TH D +GG P WN V+H +P
Sbjct: 84 MHGTHADRNGGSNPAWNTVLHFPVP 108
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 30.3 bits (65), Expect = 0.31
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 49 PRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISIPPAV 183
P WN+ + +P + L++FD + D+L+ A I + P +
Sbjct: 188 PVWNEELKLSVPQQYGPLKLQVFDHDMLSKDDLMGEAEIDLQPMI 232
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 29.5 bits (63), Expect = 0.55
Identities = 10/45 (22%), Positives = 24/45 (53%)
Frame = +1
Query: 49 PRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISIPPAV 183
P WN+V+ +P + L+++D + D+++ A + + P +
Sbjct: 1010 PVWNEVLTLSVPQKYGPLKLQVYDHDVLSRDDIMGEAEVDLQPMI 1054
>07_03_1636 + 28290642-28291574
Length = 310
Score = 28.7 bits (61), Expect = 0.95
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 19 THTDPSGGKTPRWNKVIHCLLPP 87
T DP GG+ P WN + +PP
Sbjct: 43 TPPDPYGGRHPAWNATLRFTVPP 65
>03_06_0619 -
35136435-35136728,35137155-35137358,35137476-35137646,
35137902-35138050,35138380-35138527,35138614-35138682,
35138767-35139027,35139223-35139417,35139772-35139888,
35140026-35140961
Length = 847
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 10 IYETHTDPSGGKTPRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISIPPAVLK 189
+ +T P+ + PRW + + V+ + + D F +LI A + + +L
Sbjct: 91 VAQTRVIPNS-ENPRWEERFRVEVAHAVSRLEFHVKDNDVFGA-QLIGVASLPVD-RILS 147
Query: 190 GETHEDWYPLNG 225
G E W+P++G
Sbjct: 148 GAPAEGWFPIDG 159
>07_03_0505 + 18858406-18858522,18859860-18859955,18860760-18861047
Length = 166
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 49 PRWNKVIHCLLPPGVNSVYLEIFDECSFTMDELIAWAHISI 171
P WN+ + + + V +E+FD+ +FT D+ + A I
Sbjct: 52 PEWNEELTLSITNMMLPVKIEVFDKDTFTKDDSMGDAEFGI 92
>04_01_0359 + 4711289-4713052,4713423-4713950
Length = 763
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 121 ECSFTMDELIAWAHISIPPAVLKGETHEDWYPL 219
+C D LIA A+ SIP +L T D +PL
Sbjct: 51 QCQRVSDFLIAMAYFSIPLELLYFATCSDLFPL 83
>08_01_0356 +
3131214-3132443,3132584-3132778,3132892-3132972,
3133324-3133383,3133466-3133560,3133660-3133816,
3133896-3134021,3134398-3134478,3134557-3134647,
3134735-3134868,3135068-3135136,3135219-3135308,
3135405-3135508,3135594-3135762,3136066-3136134
Length = 916
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -2
Query: 122 SSNISKYTELTPG--GNKQWITLFQRGV-FPP 36
+S SK ++ PG G ++W TL GV FPP
Sbjct: 355 NSQFSKTMKVPPGSGGGQKWTTLVHSGVIFPP 386
>01_07_0206 + 41990251-41992032,41992131-41992361
Length = 670
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 190 GETHEDWYPLNGKQGDGMEGMINLVLSYTVG 282
G TH LNG G G G L+L Y G
Sbjct: 591 GTTHSSCSSLNGGSGGGWSGCGVLMLCYAAG 621
>11_01_0793 - 6978688-6980234,6982769-6982843,6983383-6983584
Length = 607
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 143 SSIVNEHSSNISKYTELTPGGN 78
S ++ N+SK TELT GGN
Sbjct: 580 SGVIPPEIGNLSKLTELTLGGN 601
>06_01_0559 - 3973261-3973778,3974694-3975591
Length = 471
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 172 PPAVLKGETHEDWYPLNGKQGDGMEGMINL 261
PP+++K DW P +G +G G +++
Sbjct: 41 PPSIVKAVLSADWAPFSGPRGPHRLGELDV 70
>02_02_0300 -
8746526-8747224,8749033-8749089,8749414-8749650,
8750061-8750172,8750258-8750538,8752032-8752244,
8753105-8753636,8753871-8753899
Length = 719
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 28 DPSGGKTPRWNK--VIHCLLPPGVNSVYLEI 114
DP G RWNK VI CL+ V+ ++ I
Sbjct: 73 DPQGPFLQRWNKIFVISCLIAVSVDPLFFYI 103
>08_01_0984 - 9952630-9954132
Length = 500
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 8 VYTKLIPILVVERHRVGIKLSTAYYHLVLTPYI 106
+++KLI +V R VG L +Y+L + P +
Sbjct: 293 LHSKLISYMVAGRDTVGTTLPWFFYNLAMNPRV 325
>06_01_1137 +
9412230-9412378,9412549-9412634,9413417-9413496,
9413826-9413881,9414038-9414086,9414692-9414841,
9414993-9415088,9415442-9415555,9415655-9415785,
9416171-9416408,9416603-9416656,9417100-9417117,
9417906-9418722,9418797-9418846
Length = 695
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 190 GETHEDWYPLNGKQGDG 240
G HE W P G+ GDG
Sbjct: 669 GPDHETWVPPEGQTGDG 685
>11_06_0050 + 19631164-19631987,19632103-19634023
Length = 914
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 187 KGETHEDWYPLNGKQGDGME 246
KG HE WY + G G+E
Sbjct: 381 KGNQHEYWYKVYHSMGSGLE 400
>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 109 EIFDECSFTMDELIAWAHISIPPAVLKGE 195
E F ECS + +++ AW I+ + ++G+
Sbjct: 1578 EKFGECSVSQEQINAWIRINGSKSCMRGQ 1606
>01_04_0133 + 16477502-16479475
Length = 657
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 1 ARGIYETHTDPSGGKTPRWNKVIHCLLPPGVNSVYLEIF 117
AR I+E D + T WN +++C + G+ ++ E+F
Sbjct: 197 ARSIFELMPDRN---TVTWNTMLNCYVKAGMINMAAEVF 232
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,686,147
Number of Sequences: 37544
Number of extensions: 245539
Number of successful extensions: 513
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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