Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P13
         (339 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4636|AAF57070.2|  406|Drosophila melanogaster CG2246-PA...    77   8e-15
AE014297-4635|AAN14244.1|  387|Drosophila melanogaster CG2246-PB...    77   8e-15
AY047540-1|AAK77272.1|  367|Drosophila melanogaster GH05377p pro...    73   1e-13
AE014297-4640|AAN14248.1|  386|Drosophila melanogaster CG2246-PE...    73   1e-13
AE014297-4639|AAN14247.1|  386|Drosophila melanogaster CG2246-PC...    73   1e-13
AE014297-4638|AAN14246.1|  367|Drosophila melanogaster CG2246-PF...    73   1e-13
AE014297-4637|AAN14245.1|  367|Drosophila melanogaster CG2246-PD...    73   1e-13
BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p pro...    31   0.38 
AY071526-1|AAL49148.1|  350|Drosophila melanogaster RE57174p pro...    31   0.38 
AE014296-1709|AAF50223.2|  350|Drosophila melanogaster CG6767-PA...    31   0.38 
AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB...    31   0.38 
BT024222-1|ABC86284.1|  599|Drosophila melanogaster LP17815p pro...    29   1.5  
BT001502-1|AAN71257.1|  599|Drosophila melanogaster LD34776p pro...    29   1.5  
BT001483-1|AAN71238.1|  599|Drosophila melanogaster LD22379p pro...    29   1.5  
AY061066-1|AAL28614.1|  599|Drosophila melanogaster LD03515p pro...    29   1.5  
AE014297-858|AAF54325.2|  643|Drosophila melanogaster CG11984-PC...    29   1.5  
AE014297-857|AAF54323.2|  643|Drosophila melanogaster CG11984-PB...    29   1.5  
AE014297-856|AAF54324.2|  643|Drosophila melanogaster CG11984-PA...    29   1.5  

>AE014297-4636|AAF57070.2|  406|Drosophila melanogaster CG2246-PA,
           isoform A protein.
          Length = 406

 Score = 76.6 bits (180), Expect = 8e-15
 Identities = 33/62 (53%), Positives = 50/62 (80%)
 Frame = +2

Query: 152 NKTRVVGSSNRSRKSNMEGNATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRE 331
           NK   V    R R S+M+  +TSDIVI++GNSHP+LA+++A+R+G++ GGCSV+HK++RE
Sbjct: 6   NKLGSVRPPKRCR-SDMDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRE 64

Query: 332 TM 337
           T+
Sbjct: 65  TI 66


>AE014297-4635|AAN14244.1|  387|Drosophila melanogaster CG2246-PB,
           isoform B protein.
          Length = 387

 Score = 76.6 bits (180), Expect = 8e-15
 Identities = 33/62 (53%), Positives = 50/62 (80%)
 Frame = +2

Query: 152 NKTRVVGSSNRSRKSNMEGNATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRE 331
           NK   V    R R S+M+  +TSDIVI++GNSHP+LA+++A+R+G++ GGCSV+HK++RE
Sbjct: 6   NKLGSVRPPKRCR-SDMDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRE 64

Query: 332 TM 337
           T+
Sbjct: 65  TI 66


>AY047540-1|AAK77272.1|  367|Drosophila melanogaster GH05377p
           protein.
          Length = 367

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 27/46 (58%), Positives = 43/46 (93%)
 Frame = +2

Query: 200 MEGNATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRETM 337
           M+  +TSDIVI++GNSHP+LA+++A+R+G++ GGCSV+HK++RET+
Sbjct: 1   MDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRETI 46


>AE014297-4640|AAN14248.1|  386|Drosophila melanogaster CG2246-PE,
           isoform E protein.
          Length = 386

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 27/46 (58%), Positives = 43/46 (93%)
 Frame = +2

Query: 200 MEGNATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRETM 337
           M+  +TSDIVI++GNSHP+LA+++A+R+G++ GGCSV+HK++RET+
Sbjct: 1   MDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRETI 46


>AE014297-4639|AAN14247.1|  386|Drosophila melanogaster CG2246-PC,
           isoform C protein.
          Length = 386

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 27/46 (58%), Positives = 43/46 (93%)
 Frame = +2

Query: 200 MEGNATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRETM 337
           M+  +TSDIVI++GNSHP+LA+++A+R+G++ GGCSV+HK++RET+
Sbjct: 1   MDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRETI 46


>AE014297-4638|AAN14246.1|  367|Drosophila melanogaster CG2246-PF,
           isoform F protein.
          Length = 367

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 27/46 (58%), Positives = 43/46 (93%)
 Frame = +2

Query: 200 MEGNATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRETM 337
           M+  +TSDIVI++GNSHP+LA+++A+R+G++ GGCSV+HK++RET+
Sbjct: 1   MDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRETI 46


>AE014297-4637|AAN14245.1|  367|Drosophila melanogaster CG2246-PD,
           isoform D protein.
          Length = 367

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 27/46 (58%), Positives = 43/46 (93%)
 Frame = +2

Query: 200 MEGNATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRETM 337
           M+  +TSDIVI++GNSHP+LA+++A+R+G++ GGCSV+HK++RET+
Sbjct: 1   MDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRETI 46


>BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p
           protein.
          Length = 372

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 197 NMEGNATSDIVILSGNSHPELADLIAKRLGVRKG 298
           N+  +   +I + SG SHP+LA  I  RLG+  G
Sbjct: 26  NLIHSRMPNIKVFSGTSHPDLAQRIVDRLGIDLG 59


>AY071526-1|AAL49148.1|  350|Drosophila melanogaster RE57174p
           protein.
          Length = 350

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 197 NMEGNATSDIVILSGNSHPELADLIAKRLGVRKG 298
           N+  +   +I + SG SHP+LA  I  RLG+  G
Sbjct: 27  NLIHSRMPNIKVFSGTSHPDLAQRIVDRLGIDLG 60


>AE014296-1709|AAF50223.2|  350|Drosophila melanogaster CG6767-PA,
           isoform A protein.
          Length = 350

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 197 NMEGNATSDIVILSGNSHPELADLIAKRLGVRKG 298
           N+  +   +I + SG SHP+LA  I  RLG+  G
Sbjct: 27  NLIHSRMPNIKVFSGTSHPDLAQRIVDRLGIDLG 60


>AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB,
           isoform B protein.
          Length = 388

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 197 NMEGNATSDIVILSGNSHPELADLIAKRLGVRKG 298
           N+  +   +I + SG SHP+LA  I  RLG+  G
Sbjct: 42  NLIHSRMPNIKVFSGTSHPDLAQRIVDRLGIDLG 75


>BT024222-1|ABC86284.1|  599|Drosophila melanogaster LP17815p
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +2

Query: 182 RSRKSNMEGNATSDIVILSGNSHPE---LADLIAKRLGVRKGG 301
           R+R+SNM  +++S +  LS +       +A+L+++  GVR+GG
Sbjct: 171 RTRRSNMHFSSSSGLSALSPSGRESVDPIAELLSQLSGVRRGG 213


>BT001502-1|AAN71257.1|  599|Drosophila melanogaster LD34776p
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +2

Query: 182 RSRKSNMEGNATSDIVILSGNSHPE---LADLIAKRLGVRKGG 301
           R+R+SNM  +++S +  LS +       +A+L+++  GVR+GG
Sbjct: 171 RTRRSNMHFSSSSGLSALSPSGRESVDPIAELLSQLSGVRRGG 213


>BT001483-1|AAN71238.1|  599|Drosophila melanogaster LD22379p
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +2

Query: 182 RSRKSNMEGNATSDIVILSGNSHPE---LADLIAKRLGVRKGG 301
           R+R+SNM  +++S +  LS +       +A+L+++  GVR+GG
Sbjct: 171 RTRRSNMHFSSSSGLSALSPSGRESVDPIAELLSQLSGVRRGG 213


>AY061066-1|AAL28614.1|  599|Drosophila melanogaster LD03515p
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +2

Query: 182 RSRKSNMEGNATSDIVILSGNSHPE---LADLIAKRLGVRKGG 301
           R+R+SNM  +++S +  LS +       +A+L+++  GVR+GG
Sbjct: 171 RTRRSNMHFSSSSGLSALSPSGRESVDPIAELLSQLSGVRRGG 213


>AE014297-858|AAF54325.2|  643|Drosophila melanogaster CG11984-PC,
           isoform C protein.
          Length = 643

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +2

Query: 182 RSRKSNMEGNATSDIVILSGNSHPE---LADLIAKRLGVRKGG 301
           R+R+SNM  +++S +  LS +       +A+L+++  GVR+GG
Sbjct: 215 RTRRSNMHFSSSSGLSALSPSGRESVDPIAELLSQLSGVRRGG 257


>AE014297-857|AAF54323.2|  643|Drosophila melanogaster CG11984-PB,
           isoform B protein.
          Length = 643

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +2

Query: 182 RSRKSNMEGNATSDIVILSGNSHPE---LADLIAKRLGVRKGG 301
           R+R+SNM  +++S +  LS +       +A+L+++  GVR+GG
Sbjct: 215 RTRRSNMHFSSSSGLSALSPSGRESVDPIAELLSQLSGVRRGG 257


>AE014297-856|AAF54324.2|  643|Drosophila melanogaster CG11984-PA,
           isoform A protein.
          Length = 643

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +2

Query: 182 RSRKSNMEGNATSDIVILSGNSHPE---LADLIAKRLGVRKGG 301
           R+R+SNM  +++S +  LS +       +A+L+++  GVR+GG
Sbjct: 215 RTRRSNMHFSSSSGLSALSPSGRESVDPIAELLSQLSGVRRGG 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,603,788
Number of Sequences: 53049
Number of extensions: 263372
Number of successful extensions: 645
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)