Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P13
(339 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 55 1e-08
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 31 0.28
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 31 0.28
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 29 0.85
U70848-5|AAB09109.2| 210|Caenorhabditis elegans Hypothetical pr... 28 2.0
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical pr... 27 3.4
AF016418-8|AAK18897.1| 330|Caenorhabditis elegans Serpentine re... 27 3.4
U28740-1|AAA68317.3| 434|Caenorhabditis elegans Hypothetical pr... 26 6.0
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 26 6.0
M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiport... 26 7.9
AF067949-2|AAC19235.1| 357|Caenorhabditis elegans Hypothetical ... 26 7.9
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 55.2 bits (127), Expect = 1e-08
Identities = 23/42 (54%), Positives = 36/42 (85%)
Frame = +2
Query: 209 NATSDIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRET 334
+A+S +V+L+GNSHPELA ++++RL +R G +VY+KT+RET
Sbjct: 6 DASSGMVLLTGNSHPELAKMVSERLEIRLGEATVYNKTNRET 47
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +2
Query: 77 IKHLFVNKYGNCKHKAVIRLFIMFLNKTRVVGSSNRSRKSNMEGNATSDIVILSGNSHPE 256
+ H ++K + H R F + V + ++ S+ E +I + SG+SHP+
Sbjct: 14 VDHSHLHKDHSIHHPTPPRSFFSS-SSLAVHPNVETAQSSSEEDLRMPNIKVFSGSSHPD 72
Query: 257 LADLIAKRLGVRKGGCSVYHKTHRET 334
L+ I +RL + S+ +++ET
Sbjct: 73 LSTRICERLQLEVSKASLKKFSNKET 98
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +2
Query: 77 IKHLFVNKYGNCKHKAVIRLFIMFLNKTRVVGSSNRSRKSNMEGNATSDIVILSGNSHPE 256
+ H ++K + H R F + V + ++ S+ E +I + SG+SHP+
Sbjct: 83 VDHSHLHKDHSIHHPTPPRSFFSS-SSLAVHPNVETAQSSSEEDLRMPNIKVFSGSSHPD 141
Query: 257 LADLIAKRLGVRKGGCSVYHKTHRET 334
L+ I +RL + S+ +++ET
Sbjct: 142 LSTRICERLQLEVSKASLKKFSNKET 167
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 29.1 bits (62), Expect = 0.85
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 221 DIVILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRET 334
+I + SG+SHP+L+ I +RL + S+ +++ET
Sbjct: 3 NIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKET 40
>U70848-5|AAB09109.2| 210|Caenorhabditis elegans Hypothetical
protein C43G2.3 protein.
Length = 210
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 229 NNVRRCIPLHIALTRSITGTYDSGFVEKHNK*PDDSLVFTIAVFINKQM 83
NN+R+ + H+ + TGTY + P DS V I+V KQM
Sbjct: 64 NNLRQIVGNHLCQGKFETGTYKFKCQSTKSSQPVDSTVTMISVRAIKQM 112
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 230 ILSGNSHPELADLIAKRLGVRKGGCSVYHKTHRET 334
+ SG+SHP+L+ I +RL + S+ +++ET
Sbjct: 5 VFSGSSHPDLSTRICERLQLEVSKASLKKFSNKET 39
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
protein F32H2.5 protein.
Length = 2586
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +2
Query: 104 GNCKHKAVIRLFIMFLNKTRVVGSSNRSRKSNMEGNATSDIVILSGNSHPELADLIAKRL 283
G C+ + V +FI K + + ++ KSN +G+ I SG +L +
Sbjct: 230 GYCRTEGVAAIFIQRKKKAQRLYATVVHAKSNTDGHKEHGITFPSGERQAQLLQEVYSEA 289
Query: 284 GVRKGGCSVYH 316
G+ SVY+
Sbjct: 290 GIDPN--SVYY 298
>Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical
protein W05B5.2 protein.
Length = 362
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 176 SNRSRKSNMEGNATSDIVILSGNSHPELADLIAKRL 283
+N + S+ E TS+I+ L N+H E D+IA+ L
Sbjct: 5 NNVTSGSSEEDYDTSEIIGLQVNTHEEYEDIIAEAL 40
>AF016418-8|AAK18897.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein169 protein.
Length = 330
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 141 INNLMTALCLQLPYLLTNKCFIFYVIYIFSY 49
I N +T LC + + L IF+V+ IF Y
Sbjct: 191 IENTVTGLCFSISFALFVIQIIFFVVSIFLY 221
>U28740-1|AAA68317.3| 434|Caenorhabditis elegans Hypothetical
protein B0563.6a protein.
Length = 434
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 92 VNKYGNCKHKAVIRLFIMFLNKTRVVGSSNRSRKSNME---GNATSDIVILSG 241
+ K G+ +H +++IMF NK + S+ SRK + T DI + SG
Sbjct: 349 IQKQGSVEHTTNSKVWIMFKNKFQRDSLSHHSRKFSRHMPIEQDTVDIQLASG 401
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 229 NNVRRCIPLHIALTRSITGTYDSGFVEKHNK*PDDSLV 116
+++ R +P L SI+ +DS FV+ +NK ++L+
Sbjct: 523 SDLNRTLPAESDLDCSISDFFDSSFVDVNNKTRPEALI 560
>M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiporter
protein.
Length = 609
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +2
Query: 47 LYEKIYIT*KIKHLFVNKYGNCKHKAVIRLFIMFLNKTRVVGSSNRSRKSNMEGNATSDI 226
++E+I++ + LF+N +G + + + +K ++GS N S G + +
Sbjct: 127 VFEEIHVN---EFLFINVFGEALFNDGVTVVLYQCSKFALIGSENLSVLDYATGGLSFFV 183
Query: 227 VILSG 241
V L G
Sbjct: 184 VALGG 188
>AF067949-2|AAC19235.1| 357|Caenorhabditis elegans Hypothetical
protein T10H9.1 protein.
Length = 357
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 125 VIRLFIMFLNKTRVVGSSNRSRKSNMEGNATSDIVIL 235
+ +LF+ L +TRVV RSR++ + N+ + +VIL
Sbjct: 201 ICKLFV--LRETRVVNVKKRSRENFQQVNSLTVMVIL 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,719,883
Number of Sequences: 27780
Number of extensions: 143645
Number of successful extensions: 352
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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