Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P11
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   0.92 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   8.5  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   8.5  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   8.5  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 430 WWWDMDVDVLLYD 392
           WWW+M +  L +D
Sbjct: 366 WWWNMKISNLSFD 378


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 84  ASGLAEPSAATAANTKNAFMLLHG 13
           AS  AEP +     T     LLHG
Sbjct: 170 ASVKAEPGSTGTTTTSTGTRLLHG 193


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 389 PIVQKHIYVH 418
           P++QKH+ +H
Sbjct: 317 PLIQKHLKIH 326


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 64  ECRYGSQYQECF 29
           EC  G++Y +C+
Sbjct: 125 ECNIGNKYTDCY 136


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 64  ECRYGSQYQECF 29
           EC  G++Y +C+
Sbjct: 125 ECNIGNKYTDCY 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,482
Number of Sequences: 438
Number of extensions: 540
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)