Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P10
(526 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 31 0.11
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 28 0.98
SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating ... 27 1.7
SPBC25H2.06c |hrf1||COPII-coated vesicle component Hrf1 |Schizos... 26 3.0
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 26 3.0
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 26 4.0
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 26 4.0
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 26 4.0
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 25 6.9
SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual 25 6.9
SPBC215.11c |||aldo/keto reductase, unknown biological role|Schi... 25 6.9
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 25 9.1
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 25 9.1
SPCC11E10.07c |||translation initiation factor eIF2B alpha subun... 25 9.1
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.1 bits (67), Expect = 0.11
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = +1
Query: 109 CNLCIYTNEISLTAIIRNGIIAFFNVFVTKVFKAKCMHLSLQYRGFLSD-DCDDTIVDLS 285
C+ + N++ + + RN + F ++V ++ +K + Q G L D DCD+ +V
Sbjct: 775 CDRYDFVNDL-VFYLFRNNMFQFIEIYVQRINPSK----TPQVVGALLDIDCDEELVQNL 829
Query: 286 KLSIADAEPDVTVLEVQNTSNRLATAKDYV--LRRCNQTDAILFD 414
+S+ P ++E NRL Y+ L + D ++D
Sbjct: 830 LMSVVGQVPVDELVEEVERRNRLKLLLPYLESLLQSGSQDRAIYD 874
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 27.9 bits (59), Expect = 0.98
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 121 IYTNEISLTAIIRNGIIAFFNV 186
+YTN+++L AII N + FNV
Sbjct: 1116 VYTNDVALIAIIENDKVLGFNV 1137
>SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating
kinase Crk1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 451 KIGEGVYGEVFLWRDRDGRARV 516
K+GEG Y VFL R ++ RV
Sbjct: 16 KVGEGTYAVVFLGRQKETNRRV 37
>SPBC25H2.06c |hrf1||COPII-coated vesicle component Hrf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 218 MHLALNTFVTKTLKNAIIPLRIMAVN 141
M+LA F+ ++LK A++P MA+N
Sbjct: 238 MYLATAFFLLRSLKYAVLPESTMAIN 263
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 268 TIVDLSKLSIADAEPDVTVLEVQNTSNRL 354
+IVD+ K PD ++LE+QN N L
Sbjct: 849 SIVDMVKSYFVTNNPDKSLLEIQNLLNTL 877
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 229 LQYRGFLSDDCDDTIVDLSKLSIADAEPDVTVLEVQNTSNRLAT 360
L +RG S DD I + K + + + V+E + NRL T
Sbjct: 126 LIHRGKTSGRSDDNIESIKKRFVTYTKASMPVVEYLKSQNRLIT 169
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 451 KIGEGVYGEVF-LWRDRDGRARVMK 522
K+GEG +GEV+ R +DG+ +K
Sbjct: 41 KLGEGTFGEVYKSQRRKDGKVYALK 65
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 4.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 406 LFDECYPDTVLKNCHKIGEGVYGEVF 483
++ YP + +IGEG YG+V+
Sbjct: 267 IYTYTYPKPAYEKIDQIGEGTYGKVY 292
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.0 bits (52), Expect = 6.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 367 DYVLRRCNQTDAILFDE 417
DYVL+ C Q + L DE
Sbjct: 224 DYVLKHCEQFEGFLLDE 240
>SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual
Length = 484
Score = 25.0 bits (52), Expect = 6.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 406 LFDECYPDTVLKNCHKIG 459
+FDE DT KNC IG
Sbjct: 360 IFDELVNDTSTKNCSSIG 377
>SPBC215.11c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 25.0 bits (52), Expect = 6.9
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 274 VDLSKLSIAD---AEPDVTVLEVQNTSNRLATAKDYVLRRCNQTDAILFDECYP 426
V LS++++ D AE V+ VQN N + + VL C Q I F YP
Sbjct: 164 VGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRKNEKVLEYCEQ-KGIAFIPWYP 216
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 451 KIGEGVYGEVFLWRDR-DGRARVMK 522
KIGEG YG V+ R + GR MK
Sbjct: 9 KIGEGTYGVVYKARHKLSGRIVAMK 33
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 454 IGEGVYGEVFLWRDRD-GRARVMKI 525
IG+G +G+V+L R +D R MK+
Sbjct: 272 IGKGTFGQVYLVRKKDTERVYAMKV 296
>SPCC11E10.07c |||translation initiation factor eIF2B alpha
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 24.6 bits (51), Expect = 9.1
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -3
Query: 194 VTKTLKNAIIPLRIMAVNEISFVYMHKLHLNVTSI*ILXXXXXXXSQLTYFDSILLNKNK 15
+T+TLKNA IP ++ + +SF M+++ L + + +Q+ F + K+
Sbjct: 178 MTRTLKNACIPTCMVLDSAVSFT-MNRVDLVLVGAEGVVENGGLINQIGTFQLAVFAKHA 236
Query: 14 IKP 6
KP
Sbjct: 237 HKP 239
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,192,665
Number of Sequences: 5004
Number of extensions: 44335
Number of successful extensions: 151
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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