Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_P07
(590 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060986-1|AAL28534.1| 215|Drosophila melanogaster GM14292p pro... 55 8e-08
AE014298-642|AAF45957.1| 215|Drosophila melanogaster CG11444-PA... 55 8e-08
BT024370-1|ABC86432.1| 189|Drosophila melanogaster IP07252p pro... 41 0.001
AE014134-1632|AAF52770.1| 189|Drosophila melanogaster CG4438-PA... 41 0.001
AY060422-1|AAL25461.1| 306|Drosophila melanogaster LD39243p pro... 29 4.7
AE014134-1248|AAF52493.1| 306|Drosophila melanogaster CG4502-PB... 29 4.7
AE014134-1247|AAF52492.1| 306|Drosophila melanogaster CG4502-PA... 29 4.7
AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T pro... 29 6.2
AE014296-2932|AAS64974.1| 884|Drosophila melanogaster CG6292-PA... 29 6.2
AE014296-2931|AAF49325.1| 1097|Drosophila melanogaster CG6292-PB... 29 6.2
>AY060986-1|AAL28534.1| 215|Drosophila melanogaster GM14292p
protein.
Length = 215
Score = 54.8 bits (126), Expect = 8e-08
Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 KGVSGLIEVENPNRVVKN-NKKLS--NLDN----AGQGQQPQLSXXXXXXXXXXXXXXXX 519
KGV+ LIE+ENPNRV K +KLS LD+ AG +P+LS
Sbjct: 106 KGVASLIEIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRY 165
Query: 520 XXLHAEGKTDQARADLARL 576
LHA GKT +A+ADLARL
Sbjct: 166 EKLHAAGKTTEAKADLARL 184
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 163 QGRNRKFTSPEELEEQRKHDEQK 231
+GR+R FTSPEEL+++ + D +
Sbjct: 10 KGRSRHFTSPEELQQESEEDSDQ 32
>AE014298-642|AAF45957.1| 215|Drosophila melanogaster CG11444-PA
protein.
Length = 215
Score = 54.8 bits (126), Expect = 8e-08
Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 KGVSGLIEVENPNRVVKN-NKKLS--NLDN----AGQGQQPQLSXXXXXXXXXXXXXXXX 519
KGV+ LIE+ENPNRV K +KLS LD+ AG +P+LS
Sbjct: 106 KGVASLIEIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRY 165
Query: 520 XXLHAEGKTDQARADLARL 576
LHA GKT +A+ADLARL
Sbjct: 166 EKLHAAGKTTEAKADLARL 184
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 163 QGRNRKFTSPEELEEQRKHDEQK 231
+GR+R FTSPEEL+++ + D +
Sbjct: 10 KGRSRHFTSPEELQQESEEDSDQ 32
>BT024370-1|ABC86432.1| 189|Drosophila melanogaster IP07252p
protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 361 KGVSGLIEVENPNRVVKNN-KKLSNLDNAGQGQQPQLSXXXXXXXXXXXXXXXXXXLHAE 537
KGV+ LIE++NPNRV K +K+S + Q LH
Sbjct: 92 KGVASLIEIDNPNRVSKKGPQKISAI------MLDQTKAGLSRRDQDQSARKRYEKLHVA 145
Query: 538 GKTDQARADLARL 576
GKT +ARADLARL
Sbjct: 146 GKTTEARADLARL 158
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 163 QGRNRKFTSPEELEEQRKHD 222
+GR R+FTSPEEL ++ + D
Sbjct: 10 KGRTRQFTSPEELRQESEDD 29
>AE014134-1632|AAF52770.1| 189|Drosophila melanogaster CG4438-PA
protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 361 KGVSGLIEVENPNRVVKNN-KKLSNLDNAGQGQQPQLSXXXXXXXXXXXXXXXXXXLHAE 537
KGV+ LIE++NPNRV K +K+S + Q LH
Sbjct: 92 KGVASLIEIDNPNRVSKKGPQKISAI------MLDQTKAGLSRRDQDQSARKRYEKLHVA 145
Query: 538 GKTDQARADLARL 576
GKT +ARADLARL
Sbjct: 146 GKTTEARADLARL 158
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 163 QGRNRKFTSPEELEEQRKHD 222
+GR R+FTSPEEL ++ + D
Sbjct: 10 KGRTRQFTSPEELRQESEDD 29
>AY060422-1|AAL25461.1| 306|Drosophila melanogaster LD39243p
protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2
Query: 292 ILLH*NFPDHDPFAPRF 242
ILLH +FPD+ PFAP F
Sbjct: 198 ILLHLSFPDNFPFAPPF 214
>AE014134-1248|AAF52493.1| 306|Drosophila melanogaster CG4502-PB,
isoform B protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2
Query: 292 ILLH*NFPDHDPFAPRF 242
ILLH +FPD+ PFAP F
Sbjct: 198 ILLHLSFPDNFPFAPPF 214
>AE014134-1247|AAF52492.1| 306|Drosophila melanogaster CG4502-PA,
isoform A protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2
Query: 292 ILLH*NFPDHDPFAPRF 242
ILLH +FPD+ PFAP F
Sbjct: 198 ILLHLSFPDNFPFAPPF 214
>AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T
protein.
Length = 1097
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 154 HKSQGRNRKFTSPEELEEQRKHDEQKKKWKTGGQKD 261
HK + +++ T EE ++ K D+QK + +GG KD
Sbjct: 881 HKEKDKSKDKTEKEE-RKKHKRDKQKDRSGSGGSKD 915
>AE014296-2932|AAS64974.1| 884|Drosophila melanogaster CG6292-PA,
isoform A protein.
Length = 884
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 154 HKSQGRNRKFTSPEELEEQRKHDEQKKKWKTGGQKD 261
HK + +++ T EE ++ +K D+QK + +GG KD
Sbjct: 668 HKEKDKSKDKTEKEERKKHKK-DKQKDRSGSGGSKD 702
>AE014296-2931|AAF49325.1| 1097|Drosophila melanogaster CG6292-PB,
isoform B protein.
Length = 1097
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 154 HKSQGRNRKFTSPEELEEQRKHDEQKKKWKTGGQKD 261
HK + +++ T EE ++ +K D+QK + +GG KD
Sbjct: 881 HKEKDKSKDKTEKEERKKHKK-DKQKDRSGSGGSKD 915
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,471,869
Number of Sequences: 53049
Number of extensions: 308612
Number of successful extensions: 766
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -